Gene : AT1G62760 A. thaliana TAIR10
Defline:  (1 of 1) PTHR31080//PTHR31080:SF8 - FAMILY NOT NAMED // F23N19.12 Genomic Order:  5183
Name:  ? AT1G62760 Secondary Identifier:  ? PAC:19657477
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-1081 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G62760 0.5kb upstream 0.5kb upstream 1439 true Chr1: 23237574-23239012 Arabidopsis thaliana
AT1G62760 0.5kb upstream 0.5kb upstream 500 false Chr1: 23238513-23239012 Arabidopsis thaliana
AT1G62760 0.5kb downstream 0.5kb downstream 1439 true Chr1: 23237074-23238512 Arabidopsis thaliana
AT1G62760 0.5kb downstream 0.5kb downstream 500 false Chr1: 23237074-23237573 Arabidopsis thaliana
AT1G62760 1.0kb upstream 1.0kb upstream 1939 true Chr1: 23237574-23239512 Arabidopsis thaliana
AT1G62760 1.0kb upstream 1.0kb upstream 1000 false Chr1: 23238513-23239512 Arabidopsis thaliana
AT1G62760 1.0kb downstream 1.0kb downstream 1939 true Chr1: 23236574-23238512 Arabidopsis thaliana
AT1G62760 1.0kb downstream 1.0kb downstream 1000 false Chr1: 23236574-23237573 Arabidopsis thaliana
AT1G62760 2.0kb upstream 2.0kb upstream 2939 true Chr1: 23237574-23240512 Arabidopsis thaliana
AT1G62760 2.0kb upstream 2.0kb upstream 2000 false Chr1: 23238513-23240512 Arabidopsis thaliana
AT1G62760 2.0kb downstream 2.0kb downstream 2939 true Chr1: 23235574-23238512 Arabidopsis thaliana
AT1G62760 2.0kb downstream 2.0kb downstream 2000 false Chr1: 23235574-23237573 Arabidopsis thaliana
AT1G62760 5.0kb upstream 5.0kb upstream 5939 true Chr1: 23237574-23243512 Arabidopsis thaliana
AT1G62760 5.0kb upstream 5.0kb upstream 5000 false Chr1: 23238513-23243512 Arabidopsis thaliana
AT1G62760 5.0kb downstream 5.0kb downstream 5939 true Chr1: 23232574-23238512 Arabidopsis thaliana
AT1G62760 5.0kb downstream 5.0kb downstream 5000 false Chr1: 23232574-23237573 Arabidopsis thaliana
AT1G62760 10.0kb upstream 10.0kb upstream 10939 true Chr1: 23237574-23248512 Arabidopsis thaliana
AT1G62760 10.0kb upstream 10.0kb upstream 10000 false Chr1: 23238513-23248512 Arabidopsis thaliana
AT1G62760 10.0kb downstream 10.0kb downstream 10939 true Chr1: 23227574-23238512 Arabidopsis thaliana
AT1G62760 10.0kb downstream 10.0kb downstream 10000 false Chr1: 23227574-23237573 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343319 5261 Brassicaceae View MSA
123783558 5264 Brassicales-Malvales View MSA
124281783 5266 SBM View MSA
124251133 5268 Malvidae View MSA
124072666 5270 Rosid View MSA
123751304 5271 Pentapetalae View MSA
122797599 5272 Eudicot View MSA
122046899 5273 Angiosperm View MSA
121310670 5274 Embryophyte View MSA
123348096 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.834        
cufflinks 0.13     Low Low
cufflinks 0.608        
cufflinks 0.97        
cufflinks 1.823       High
cufflinks 0.238     Low  

0 Strain