Gene : TUA1 A. thaliana TAIR10
Primary Identifier:  ? AT1G64740 Defline:  (1 of 3) PTHR11588:SF48 - TUBULIN ALPHA-1 CHAIN-RELATED
Genomic Order:  5398 Name:  ? AT1G64740
Secondary Identifier:  ? PAC:19649340
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G64740 0.5kb upstream 0.5kb upstream 2982 true Chr1: 24049506-24052487 Arabidopsis thaliana
AT1G64740 0.5kb upstream 0.5kb upstream 500 false Chr1: 24049506-24050005 Arabidopsis thaliana
AT1G64740 0.5kb downstream 0.5kb downstream 2982 true Chr1: 24050006-24052987 Arabidopsis thaliana
AT1G64740 0.5kb downstream 0.5kb downstream 500 false Chr1: 24052488-24052987 Arabidopsis thaliana
AT1G64740 1.0kb upstream 1.0kb upstream 3482 true Chr1: 24049006-24052487 Arabidopsis thaliana
AT1G64740 1.0kb upstream 1.0kb upstream 1000 false Chr1: 24049006-24050005 Arabidopsis thaliana
AT1G64740 1.0kb downstream 1.0kb downstream 3482 true Chr1: 24050006-24053487 Arabidopsis thaliana
AT1G64740 1.0kb downstream 1.0kb downstream 1000 false Chr1: 24052488-24053487 Arabidopsis thaliana
AT1G64740 2.0kb upstream 2.0kb upstream 4482 true Chr1: 24048006-24052487 Arabidopsis thaliana
AT1G64740 2.0kb upstream 2.0kb upstream 2000 false Chr1: 24048006-24050005 Arabidopsis thaliana
AT1G64740 2.0kb downstream 2.0kb downstream 4482 true Chr1: 24050006-24054487 Arabidopsis thaliana
AT1G64740 2.0kb downstream 2.0kb downstream 2000 false Chr1: 24052488-24054487 Arabidopsis thaliana
AT1G64740 5.0kb upstream 5.0kb upstream 7482 true Chr1: 24045006-24052487 Arabidopsis thaliana
AT1G64740 5.0kb upstream 5.0kb upstream 5000 false Chr1: 24045006-24050005 Arabidopsis thaliana
AT1G64740 5.0kb downstream 5.0kb downstream 7482 true Chr1: 24050006-24057487 Arabidopsis thaliana
AT1G64740 5.0kb downstream 5.0kb downstream 5000 false Chr1: 24052488-24057487 Arabidopsis thaliana
AT1G64740 10.0kb upstream 10.0kb upstream 12482 true Chr1: 24040006-24052487 Arabidopsis thaliana
AT1G64740 10.0kb upstream 10.0kb upstream 10000 false Chr1: 24040006-24050005 Arabidopsis thaliana
AT1G64740 10.0kb downstream 10.0kb downstream 12482 true Chr1: 24050006-24062487 Arabidopsis thaliana
AT1G64740 10.0kb downstream 10.0kb downstream 10000 false Chr1: 24052488-24062487 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380294 5261 Brassicaceae View MSA
123838262 5264 Brassicales-Malvales View MSA
124349819 5266 SBM View MSA
124254287 5268 Malvidae View MSA
124063754 5270 Rosid View MSA
123746760 5271 Pentapetalae View MSA
122797273 5272 Eudicot View MSA
122048269 5273 Angiosperm View MSA
121350767 5274 Embryophyte View MSA
123424087 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.203       High
cufflinks 11.388        
cufflinks 15.029        
cufflinks 11.625        
cufflinks 17.021        
cufflinks 11.037        

0 Strain