Gene : AT1G24510 A. thaliana TAIR10
Defline:  (1 of 1) K09497 - T-complex protein 1 subunit epsilon (CCT5) Genomic Order:  2489
Name:  ? AT1G24510 Secondary Identifier:  ? PAC:19649586
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G24510 0.5kb upstream 0.5kb upstream 3477 true Chr1: 8685271-8688747 Arabidopsis thaliana
AT1G24510 0.5kb upstream 0.5kb upstream 500 false Chr1: 8688248-8688747 Arabidopsis thaliana
AT1G24510 0.5kb downstream 0.5kb downstream 3477 true Chr1: 8684771-8688247 Arabidopsis thaliana
AT1G24510 0.5kb downstream 0.5kb downstream 500 false Chr1: 8684771-8685270 Arabidopsis thaliana
AT1G24510 1.0kb upstream 1.0kb upstream 3977 true Chr1: 8685271-8689247 Arabidopsis thaliana
AT1G24510 1.0kb upstream 1.0kb upstream 1000 false Chr1: 8688248-8689247 Arabidopsis thaliana
AT1G24510 1.0kb downstream 1.0kb downstream 3977 true Chr1: 8684271-8688247 Arabidopsis thaliana
AT1G24510 1.0kb downstream 1.0kb downstream 1000 false Chr1: 8684271-8685270 Arabidopsis thaliana
AT1G24510 2.0kb upstream 2.0kb upstream 4977 true Chr1: 8685271-8690247 Arabidopsis thaliana
AT1G24510 2.0kb upstream 2.0kb upstream 2000 false Chr1: 8688248-8690247 Arabidopsis thaliana
AT1G24510 2.0kb downstream 2.0kb downstream 4977 true Chr1: 8683271-8688247 Arabidopsis thaliana
AT1G24510 2.0kb downstream 2.0kb downstream 2000 false Chr1: 8683271-8685270 Arabidopsis thaliana
AT1G24510 5.0kb upstream 5.0kb upstream 7977 true Chr1: 8685271-8693247 Arabidopsis thaliana
AT1G24510 5.0kb upstream 5.0kb upstream 5000 false Chr1: 8688248-8693247 Arabidopsis thaliana
AT1G24510 5.0kb downstream 5.0kb downstream 7977 true Chr1: 8680271-8688247 Arabidopsis thaliana
AT1G24510 5.0kb downstream 5.0kb downstream 5000 false Chr1: 8680271-8685270 Arabidopsis thaliana
AT1G24510 10.0kb upstream 10.0kb upstream 12977 true Chr1: 8685271-8698247 Arabidopsis thaliana
AT1G24510 10.0kb upstream 10.0kb upstream 10000 false Chr1: 8688248-8698247 Arabidopsis thaliana
AT1G24510 10.0kb downstream 10.0kb downstream 12977 true Chr1: 8675271-8688247 Arabidopsis thaliana
AT1G24510 10.0kb downstream 10.0kb downstream 10000 false Chr1: 8675271-8685270 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380136 5261 Brassicaceae View MSA
123836485 5264 Brassicales-Malvales View MSA
124345281 5266 SBM View MSA
124242380 5268 Malvidae View MSA
124068195 5270 Rosid View MSA
123739090 5271 Pentapetalae View MSA
122792390 5272 Eudicot View MSA
122043511 5273 Angiosperm View MSA
121350582 5274 Embryophyte View MSA
123425092 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.795        
cufflinks 36.355     High  
cufflinks 26.147     High  
cufflinks 39.692     High  
cufflinks 25.113       Low
cufflinks 44.221     High High

0 Strain