Gene : CDPK2 A. thaliana TAIR10
Primary Identifier:  ? AT1G35670 Defline:  (1 of 3) PTHR24349//PTHR24349:SF166 - SERINE/THREONINE-PROTEIN KINASE // CALCIUM-DEPENDENT PROTEIN KINASE 11-RELATED
Genomic Order:  3494 Name:  ? AT1G35670
Secondary Identifier:  ? PAC:19654110
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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G35670 0.5kb upstream 0.5kb upstream 3372 true Chr1: 13204881-13208252 Arabidopsis thaliana
AT1G35670 0.5kb upstream 0.5kb upstream 500 false Chr1: 13204881-13205380 Arabidopsis thaliana
AT1G35670 0.5kb downstream 0.5kb downstream 3372 true Chr1: 13205381-13208752 Arabidopsis thaliana
AT1G35670 0.5kb downstream 0.5kb downstream 500 false Chr1: 13208253-13208752 Arabidopsis thaliana
AT1G35670 1.0kb upstream 1.0kb upstream 3872 true Chr1: 13204381-13208252 Arabidopsis thaliana
AT1G35670 1.0kb upstream 1.0kb upstream 1000 false Chr1: 13204381-13205380 Arabidopsis thaliana
AT1G35670 1.0kb downstream 1.0kb downstream 3872 true Chr1: 13205381-13209252 Arabidopsis thaliana
AT1G35670 1.0kb downstream 1.0kb downstream 1000 false Chr1: 13208253-13209252 Arabidopsis thaliana
AT1G35670 2.0kb upstream 2.0kb upstream 4872 true Chr1: 13203381-13208252 Arabidopsis thaliana
AT1G35670 2.0kb upstream 2.0kb upstream 2000 false Chr1: 13203381-13205380 Arabidopsis thaliana
AT1G35670 2.0kb downstream 2.0kb downstream 4872 true Chr1: 13205381-13210252 Arabidopsis thaliana
AT1G35670 2.0kb downstream 2.0kb downstream 2000 false Chr1: 13208253-13210252 Arabidopsis thaliana
AT1G35670 5.0kb upstream 5.0kb upstream 7872 true Chr1: 13200381-13208252 Arabidopsis thaliana
AT1G35670 5.0kb upstream 5.0kb upstream 5000 false Chr1: 13200381-13205380 Arabidopsis thaliana
AT1G35670 5.0kb downstream 5.0kb downstream 7872 true Chr1: 13205381-13213252 Arabidopsis thaliana
AT1G35670 5.0kb downstream 5.0kb downstream 5000 false Chr1: 13208253-13213252 Arabidopsis thaliana
AT1G35670 10.0kb upstream 10.0kb upstream 12872 true Chr1: 13195381-13208252 Arabidopsis thaliana
AT1G35670 10.0kb upstream 10.0kb upstream 10000 false Chr1: 13195381-13205380 Arabidopsis thaliana
AT1G35670 10.0kb downstream 10.0kb downstream 12872 true Chr1: 13205381-13218252 Arabidopsis thaliana
AT1G35670 10.0kb downstream 10.0kb downstream 10000 false Chr1: 13208253-13218252 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364100 5261 Brassicaceae View MSA
123839177 5264 Brassicales-Malvales View MSA
124341928 5266 SBM View MSA
124252958 5268 Malvidae View MSA
124069708 5270 Rosid View MSA
123741053 5271 Pentapetalae View MSA
122787584 5272 Eudicot View MSA
122047311 5273 Angiosperm View MSA
121310726 5274 Embryophyte View MSA
123427978 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.42        
cufflinks 9.27        
cufflinks 10.012        
cufflinks 12.044        
cufflinks 14.734       High
cufflinks 9.527        

0 Strain