Gene : AT1G48640 A. thaliana TAIR10
Defline:  (1 of 6) PTHR22950:SF235 - LYSINE HISTIDINE TRANSPORTER 1-RELATED Genomic Order:  3894
Name:  ? AT1G48640 Secondary Identifier:  ? PAC:19654447
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G48640 0.5kb upstream 0.5kb upstream 3134 true Chr1: 17985858-17988991 Arabidopsis thaliana
AT1G48640 0.5kb upstream 0.5kb upstream 500 false Chr1: 17985858-17986357 Arabidopsis thaliana
AT1G48640 0.5kb downstream 0.5kb downstream 3134 true Chr1: 17986358-17989491 Arabidopsis thaliana
AT1G48640 0.5kb downstream 0.5kb downstream 500 false Chr1: 17988992-17989491 Arabidopsis thaliana
AT1G48640 1.0kb upstream 1.0kb upstream 3634 true Chr1: 17985358-17988991 Arabidopsis thaliana
AT1G48640 1.0kb upstream 1.0kb upstream 1000 false Chr1: 17985358-17986357 Arabidopsis thaliana
AT1G48640 1.0kb downstream 1.0kb downstream 3634 true Chr1: 17986358-17989991 Arabidopsis thaliana
AT1G48640 1.0kb downstream 1.0kb downstream 1000 false Chr1: 17988992-17989991 Arabidopsis thaliana
AT1G48640 2.0kb upstream 2.0kb upstream 4634 true Chr1: 17984358-17988991 Arabidopsis thaliana
AT1G48640 2.0kb upstream 2.0kb upstream 2000 false Chr1: 17984358-17986357 Arabidopsis thaliana
AT1G48640 2.0kb downstream 2.0kb downstream 4634 true Chr1: 17986358-17990991 Arabidopsis thaliana
AT1G48640 2.0kb downstream 2.0kb downstream 2000 false Chr1: 17988992-17990991 Arabidopsis thaliana
AT1G48640 5.0kb upstream 5.0kb upstream 7634 true Chr1: 17981358-17988991 Arabidopsis thaliana
AT1G48640 5.0kb upstream 5.0kb upstream 5000 false Chr1: 17981358-17986357 Arabidopsis thaliana
AT1G48640 5.0kb downstream 5.0kb downstream 7634 true Chr1: 17986358-17993991 Arabidopsis thaliana
AT1G48640 5.0kb downstream 5.0kb downstream 5000 false Chr1: 17988992-17993991 Arabidopsis thaliana
AT1G48640 10.0kb upstream 10.0kb upstream 12634 true Chr1: 17976358-17988991 Arabidopsis thaliana
AT1G48640 10.0kb upstream 10.0kb upstream 10000 false Chr1: 17976358-17986357 Arabidopsis thaliana
AT1G48640 10.0kb downstream 10.0kb downstream 12634 true Chr1: 17986358-17998991 Arabidopsis thaliana
AT1G48640 10.0kb downstream 10.0kb downstream 10000 false Chr1: 17988992-17998991 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376295 5261 Brassicaceae View MSA
123841690 5264 Brassicales-Malvales View MSA
124338955 5266 SBM View MSA
124238862 5268 Malvidae View MSA
124066006 5270 Rosid View MSA
123750128 5271 Pentapetalae View MSA
122791179 5272 Eudicot View MSA
122045993 5273 Angiosperm View MSA
121346963 5274 Embryophyte View MSA
123428146 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.043     Low  
cufflinks 0.166     Low  
cufflinks 0.019     Low Low
cufflinks 0.209     Low  
cufflinks 0.021     Low Low
cufflinks 0.208     Low  

0 Strain