Gene : AT1G48750 A. thaliana TAIR10
Defline:  (1 of 67) PF14368 - Probable lipid transfer (LTP_2) Genomic Order:  3904
Name:  ? AT1G48750 Secondary Identifier:  ? PAC:19656702
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G48750 0.5kb upstream 0.5kb upstream 1044 true Chr1: 18035467-18036510 Arabidopsis thaliana
AT1G48750 0.5kb upstream 0.5kb upstream 500 false Chr1: 18035467-18035966 Arabidopsis thaliana
AT1G48750 0.5kb downstream 0.5kb downstream 1044 true Chr1: 18035967-18037010 Arabidopsis thaliana
AT1G48750 0.5kb downstream 0.5kb downstream 500 false Chr1: 18036511-18037010 Arabidopsis thaliana
AT1G48750 1.0kb upstream 1.0kb upstream 1544 true Chr1: 18034967-18036510 Arabidopsis thaliana
AT1G48750 1.0kb upstream 1.0kb upstream 1000 false Chr1: 18034967-18035966 Arabidopsis thaliana
AT1G48750 1.0kb downstream 1.0kb downstream 1544 true Chr1: 18035967-18037510 Arabidopsis thaliana
AT1G48750 1.0kb downstream 1.0kb downstream 1000 false Chr1: 18036511-18037510 Arabidopsis thaliana
AT1G48750 2.0kb upstream 2.0kb upstream 2544 true Chr1: 18033967-18036510 Arabidopsis thaliana
AT1G48750 2.0kb upstream 2.0kb upstream 2000 false Chr1: 18033967-18035966 Arabidopsis thaliana
AT1G48750 2.0kb downstream 2.0kb downstream 2544 true Chr1: 18035967-18038510 Arabidopsis thaliana
AT1G48750 2.0kb downstream 2.0kb downstream 2000 false Chr1: 18036511-18038510 Arabidopsis thaliana
AT1G48750 5.0kb upstream 5.0kb upstream 5544 true Chr1: 18030967-18036510 Arabidopsis thaliana
AT1G48750 5.0kb upstream 5.0kb upstream 5000 false Chr1: 18030967-18035966 Arabidopsis thaliana
AT1G48750 5.0kb downstream 5.0kb downstream 5544 true Chr1: 18035967-18041510 Arabidopsis thaliana
AT1G48750 5.0kb downstream 5.0kb downstream 5000 false Chr1: 18036511-18041510 Arabidopsis thaliana
AT1G48750 10.0kb upstream 10.0kb upstream 10544 true Chr1: 18025967-18036510 Arabidopsis thaliana
AT1G48750 10.0kb upstream 10.0kb upstream 10000 false Chr1: 18025967-18035966 Arabidopsis thaliana
AT1G48750 10.0kb downstream 10.0kb downstream 10544 true Chr1: 18035967-18046510 Arabidopsis thaliana
AT1G48750 10.0kb downstream 10.0kb downstream 10000 false Chr1: 18036511-18046510 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376481 5261 Brassicaceae View MSA
123839110 5264 Brassicales-Malvales View MSA
124350996 5266 SBM View MSA
124250916 5268 Malvidae View MSA
124071320 5270 Rosid View MSA
123749514 5271 Pentapetalae View MSA
122786269 5272 Eudicot View MSA
122049999 5273 Angiosperm View MSA
121351204 5274 Embryophyte View MSA
123382050 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.988       Low
cufflinks 127.48     High High
cufflinks 13.312        
cufflinks 86.776     High  
cufflinks 15.626        
cufflinks 43.632     High  

0 Strain