Gene : AT1G33170 A. thaliana TAIR10
Defline:  (1 of 1) PTHR10108//PTHR10108:SF801 - METHYLTRANSFERASE // METHYLTRANSFERASE PMT18-RELATED Genomic Order:  3283
Name:  ? AT1G33170 Secondary Identifier:  ? PAC:19657869
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G33170 0.5kb upstream 0.5kb upstream 3956 true Chr1: 12026584-12030539 Arabidopsis thaliana
AT1G33170 0.5kb upstream 0.5kb upstream 500 false Chr1: 12026584-12027083 Arabidopsis thaliana
AT1G33170 0.5kb downstream 0.5kb downstream 3956 true Chr1: 12027084-12031039 Arabidopsis thaliana
AT1G33170 0.5kb downstream 0.5kb downstream 500 false Chr1: 12030540-12031039 Arabidopsis thaliana
AT1G33170 1.0kb upstream 1.0kb upstream 4456 true Chr1: 12026084-12030539 Arabidopsis thaliana
AT1G33170 1.0kb upstream 1.0kb upstream 1000 false Chr1: 12026084-12027083 Arabidopsis thaliana
AT1G33170 1.0kb downstream 1.0kb downstream 4456 true Chr1: 12027084-12031539 Arabidopsis thaliana
AT1G33170 1.0kb downstream 1.0kb downstream 1000 false Chr1: 12030540-12031539 Arabidopsis thaliana
AT1G33170 2.0kb upstream 2.0kb upstream 5456 true Chr1: 12025084-12030539 Arabidopsis thaliana
AT1G33170 2.0kb upstream 2.0kb upstream 2000 false Chr1: 12025084-12027083 Arabidopsis thaliana
AT1G33170 2.0kb downstream 2.0kb downstream 5456 true Chr1: 12027084-12032539 Arabidopsis thaliana
AT1G33170 2.0kb downstream 2.0kb downstream 2000 false Chr1: 12030540-12032539 Arabidopsis thaliana
AT1G33170 5.0kb upstream 5.0kb upstream 8456 true Chr1: 12022084-12030539 Arabidopsis thaliana
AT1G33170 5.0kb upstream 5.0kb upstream 5000 false Chr1: 12022084-12027083 Arabidopsis thaliana
AT1G33170 5.0kb downstream 5.0kb downstream 8456 true Chr1: 12027084-12035539 Arabidopsis thaliana
AT1G33170 5.0kb downstream 5.0kb downstream 5000 false Chr1: 12030540-12035539 Arabidopsis thaliana
AT1G33170 10.0kb upstream 10.0kb upstream 13456 true Chr1: 12017084-12030539 Arabidopsis thaliana
AT1G33170 10.0kb upstream 10.0kb upstream 10000 false Chr1: 12017084-12027083 Arabidopsis thaliana
AT1G33170 10.0kb downstream 10.0kb downstream 13456 true Chr1: 12027084-12040539 Arabidopsis thaliana
AT1G33170 10.0kb downstream 10.0kb downstream 10000 false Chr1: 12030540-12040539 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372449 5261 Brassicaceae View MSA
123837976 5264 Brassicales-Malvales View MSA
124339615 5266 SBM View MSA
124240259 5268 Malvidae View MSA
124063763 5270 Rosid View MSA
123736369 5271 Pentapetalae View MSA
122786286 5272 Eudicot View MSA
122046035 5273 Angiosperm View MSA
121348774 5274 Embryophyte View MSA
123381009 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.651       Low
cufflinks 56.286     High  
cufflinks 12.541        
cufflinks 42.175     High  
cufflinks 9.382        
cufflinks 61.132     High High

0 Strain