Gene : AT1G04700 A. thaliana TAIR10
Defline:  (1 of 2) PTHR23257:SF547 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K7P8-RELATED Genomic Order:  390
Name:  ? AT1G04700 Secondary Identifier:  ? PAC:19653765
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G04700 0.5kb upstream 0.5kb upstream 5166 true Chr1: 1315754-1320919 Arabidopsis thaliana
AT1G04700 0.5kb upstream 0.5kb upstream 500 false Chr1: 1315754-1316253 Arabidopsis thaliana
AT1G04700 0.5kb downstream 0.5kb downstream 5166 true Chr1: 1316254-1321419 Arabidopsis thaliana
AT1G04700 0.5kb downstream 0.5kb downstream 500 false Chr1: 1320920-1321419 Arabidopsis thaliana
AT1G04700 1.0kb upstream 1.0kb upstream 5666 true Chr1: 1315254-1320919 Arabidopsis thaliana
AT1G04700 1.0kb upstream 1.0kb upstream 1000 false Chr1: 1315254-1316253 Arabidopsis thaliana
AT1G04700 1.0kb downstream 1.0kb downstream 5666 true Chr1: 1316254-1321919 Arabidopsis thaliana
AT1G04700 1.0kb downstream 1.0kb downstream 1000 false Chr1: 1320920-1321919 Arabidopsis thaliana
AT1G04700 2.0kb upstream 2.0kb upstream 6666 true Chr1: 1314254-1320919 Arabidopsis thaliana
AT1G04700 2.0kb upstream 2.0kb upstream 2000 false Chr1: 1314254-1316253 Arabidopsis thaliana
AT1G04700 2.0kb downstream 2.0kb downstream 6666 true Chr1: 1316254-1322919 Arabidopsis thaliana
AT1G04700 2.0kb downstream 2.0kb downstream 2000 false Chr1: 1320920-1322919 Arabidopsis thaliana
AT1G04700 5.0kb upstream 5.0kb upstream 9666 true Chr1: 1311254-1320919 Arabidopsis thaliana
AT1G04700 5.0kb upstream 5.0kb upstream 5000 false Chr1: 1311254-1316253 Arabidopsis thaliana
AT1G04700 5.0kb downstream 5.0kb downstream 9666 true Chr1: 1316254-1325919 Arabidopsis thaliana
AT1G04700 5.0kb downstream 5.0kb downstream 5000 false Chr1: 1320920-1325919 Arabidopsis thaliana
AT1G04700 10.0kb upstream 10.0kb upstream 14666 true Chr1: 1306254-1320919 Arabidopsis thaliana
AT1G04700 10.0kb upstream 10.0kb upstream 10000 false Chr1: 1306254-1316253 Arabidopsis thaliana
AT1G04700 10.0kb downstream 10.0kb downstream 14666 true Chr1: 1316254-1330919 Arabidopsis thaliana
AT1G04700 10.0kb downstream 10.0kb downstream 10000 false Chr1: 1320920-1330919 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361530 5261 Brassicaceae View MSA
123829629 5264 Brassicales-Malvales View MSA
124338054 5266 SBM View MSA
124249275 5268 Malvidae View MSA
124060583 5270 Rosid View MSA
123749730 5271 Pentapetalae View MSA
122796699 5272 Eudicot View MSA
122043276 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350927 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.398        
cufflinks 0.822        
cufflinks 0.294        
cufflinks 0.883        
cufflinks 0.21     Low Low
cufflinks 0.945        

0 Strain