Gene : AT1G15790 A. thaliana TAIR10
Defline:  (1 of 2) PF16987 - KIX domain (KIX_2) Genomic Order:  1587
Name:  ? AT1G15790 Secondary Identifier:  ? PAC:19651901
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G15790 0.5kb upstream 0.5kb upstream 2335 true Chr1: 5438253-5440587 Arabidopsis thaliana
AT1G15790 0.5kb upstream 0.5kb upstream 500 false Chr1: 5440088-5440587 Arabidopsis thaliana
AT1G15790 0.5kb downstream 0.5kb downstream 2335 true Chr1: 5437753-5440087 Arabidopsis thaliana
AT1G15790 0.5kb downstream 0.5kb downstream 500 false Chr1: 5437753-5438252 Arabidopsis thaliana
AT1G15790 1.0kb upstream 1.0kb upstream 2835 true Chr1: 5438253-5441087 Arabidopsis thaliana
AT1G15790 1.0kb upstream 1.0kb upstream 1000 false Chr1: 5440088-5441087 Arabidopsis thaliana
AT1G15790 1.0kb downstream 1.0kb downstream 2835 true Chr1: 5437253-5440087 Arabidopsis thaliana
AT1G15790 1.0kb downstream 1.0kb downstream 1000 false Chr1: 5437253-5438252 Arabidopsis thaliana
AT1G15790 2.0kb upstream 2.0kb upstream 3835 true Chr1: 5438253-5442087 Arabidopsis thaliana
AT1G15790 2.0kb upstream 2.0kb upstream 2000 false Chr1: 5440088-5442087 Arabidopsis thaliana
AT1G15790 2.0kb downstream 2.0kb downstream 3835 true Chr1: 5436253-5440087 Arabidopsis thaliana
AT1G15790 2.0kb downstream 2.0kb downstream 2000 false Chr1: 5436253-5438252 Arabidopsis thaliana
AT1G15790 5.0kb upstream 5.0kb upstream 6835 true Chr1: 5438253-5445087 Arabidopsis thaliana
AT1G15790 5.0kb upstream 5.0kb upstream 5000 false Chr1: 5440088-5445087 Arabidopsis thaliana
AT1G15790 5.0kb downstream 5.0kb downstream 6835 true Chr1: 5433253-5440087 Arabidopsis thaliana
AT1G15790 5.0kb downstream 5.0kb downstream 5000 false Chr1: 5433253-5438252 Arabidopsis thaliana
AT1G15790 10.0kb upstream 10.0kb upstream 11835 true Chr1: 5438253-5450087 Arabidopsis thaliana
AT1G15790 10.0kb upstream 10.0kb upstream 10000 false Chr1: 5440088-5450087 Arabidopsis thaliana
AT1G15790 10.0kb downstream 10.0kb downstream 11835 true Chr1: 5428253-5440087 Arabidopsis thaliana
AT1G15790 10.0kb downstream 10.0kb downstream 10000 false Chr1: 5428253-5438252 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369683 5261 Brassicaceae View MSA
123799824 5264 Brassicales-Malvales View MSA
124297306 5266 SBM View MSA
124149233 5268 Malvidae View MSA
124061497 5270 Rosid View MSA
123752539 5271 Pentapetalae View MSA
122797451 5272 Eudicot View MSA
122048270 5273 Angiosperm View MSA
121350628 5274 Embryophyte View MSA
123381823 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.312       High
cufflinks 3.095        
cufflinks 1.659       Low
cufflinks 3.263        
cufflinks 3.062        
cufflinks 2.553        

0 Strain