Gene : HAB2 A. thaliana TAIR10
Primary Identifier:  ? AT1G17550 Defline:  (1 of 9) K14497 - protein phosphatase 2C (PP2C)
Genomic Order:  1769 Name:  ? AT1G17550
Secondary Identifier:  ? PAC:19656972
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G17550 0.5kb upstream 0.5kb upstream 3428 true Chr1: 6033862-6037289 Arabidopsis thaliana
AT1G17550 0.5kb upstream 0.5kb upstream 500 false Chr1: 6033862-6034361 Arabidopsis thaliana
AT1G17550 0.5kb downstream 0.5kb downstream 3428 true Chr1: 6034362-6037789 Arabidopsis thaliana
AT1G17550 0.5kb downstream 0.5kb downstream 500 false Chr1: 6037290-6037789 Arabidopsis thaliana
AT1G17550 1.0kb upstream 1.0kb upstream 3928 true Chr1: 6033362-6037289 Arabidopsis thaliana
AT1G17550 1.0kb upstream 1.0kb upstream 1000 false Chr1: 6033362-6034361 Arabidopsis thaliana
AT1G17550 1.0kb downstream 1.0kb downstream 3928 true Chr1: 6034362-6038289 Arabidopsis thaliana
AT1G17550 1.0kb downstream 1.0kb downstream 1000 false Chr1: 6037290-6038289 Arabidopsis thaliana
AT1G17550 2.0kb upstream 2.0kb upstream 4928 true Chr1: 6032362-6037289 Arabidopsis thaliana
AT1G17550 2.0kb upstream 2.0kb upstream 2000 false Chr1: 6032362-6034361 Arabidopsis thaliana
AT1G17550 2.0kb downstream 2.0kb downstream 4928 true Chr1: 6034362-6039289 Arabidopsis thaliana
AT1G17550 2.0kb downstream 2.0kb downstream 2000 false Chr1: 6037290-6039289 Arabidopsis thaliana
AT1G17550 5.0kb upstream 5.0kb upstream 7928 true Chr1: 6029362-6037289 Arabidopsis thaliana
AT1G17550 5.0kb upstream 5.0kb upstream 5000 false Chr1: 6029362-6034361 Arabidopsis thaliana
AT1G17550 5.0kb downstream 5.0kb downstream 7928 true Chr1: 6034362-6042289 Arabidopsis thaliana
AT1G17550 5.0kb downstream 5.0kb downstream 5000 false Chr1: 6037290-6042289 Arabidopsis thaliana
AT1G17550 10.0kb upstream 10.0kb upstream 12928 true Chr1: 6024362-6037289 Arabidopsis thaliana
AT1G17550 10.0kb upstream 10.0kb upstream 10000 false Chr1: 6024362-6034361 Arabidopsis thaliana
AT1G17550 10.0kb downstream 10.0kb downstream 12928 true Chr1: 6034362-6047289 Arabidopsis thaliana
AT1G17550 10.0kb downstream 10.0kb downstream 10000 false Chr1: 6037290-6047289 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367379 5261 Brassicaceae View MSA
123839854 5264 Brassicales-Malvales View MSA
124341949 5266 SBM View MSA
124245560 5268 Malvidae View MSA
124070798 5270 Rosid View MSA
123750242 5271 Pentapetalae View MSA
122786695 5272 Eudicot View MSA
122047066 5273 Angiosperm View MSA
123428982 5275 Viridiplantae View MSA
121349461 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.442     High  
cufflinks 31.715     High  
cufflinks 29.044     High Low
cufflinks 39.307     High High
cufflinks 30.316     High  
cufflinks 33.707     High  

0 Strain