Gene : ATRX A. thaliana TAIR10
Primary Identifier:  ? AT1G08600 Defline:  (1 of 1) K10779 - transcriptional regulator ATRX [EC:3.6.4.12] (ATRX)
Genomic Order:  810 Name:  ? AT1G08600
Secondary Identifier:  ? PAC:19656138
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G08600 0.5kb upstream 0.5kb upstream 10290 true Chr1: 2723324-2733613 Arabidopsis thaliana
AT1G08600 0.5kb upstream 0.5kb upstream 500 false Chr1: 2723324-2723823 Arabidopsis thaliana
AT1G08600 0.5kb downstream 0.5kb downstream 10290 true Chr1: 2723824-2734113 Arabidopsis thaliana
AT1G08600 0.5kb downstream 0.5kb downstream 500 false Chr1: 2733614-2734113 Arabidopsis thaliana
AT1G08600 1.0kb upstream 1.0kb upstream 10790 true Chr1: 2722824-2733613 Arabidopsis thaliana
AT1G08600 1.0kb upstream 1.0kb upstream 1000 false Chr1: 2722824-2723823 Arabidopsis thaliana
AT1G08600 1.0kb downstream 1.0kb downstream 10790 true Chr1: 2723824-2734613 Arabidopsis thaliana
AT1G08600 1.0kb downstream 1.0kb downstream 1000 false Chr1: 2733614-2734613 Arabidopsis thaliana
AT1G08600 2.0kb upstream 2.0kb upstream 11790 true Chr1: 2721824-2733613 Arabidopsis thaliana
AT1G08600 2.0kb upstream 2.0kb upstream 2000 false Chr1: 2721824-2723823 Arabidopsis thaliana
AT1G08600 2.0kb downstream 2.0kb downstream 11790 true Chr1: 2723824-2735613 Arabidopsis thaliana
AT1G08600 2.0kb downstream 2.0kb downstream 2000 false Chr1: 2733614-2735613 Arabidopsis thaliana
AT1G08600 5.0kb upstream 5.0kb upstream 14790 true Chr1: 2718824-2733613 Arabidopsis thaliana
AT1G08600 5.0kb upstream 5.0kb upstream 5000 false Chr1: 2718824-2723823 Arabidopsis thaliana
AT1G08600 5.0kb downstream 5.0kb downstream 14790 true Chr1: 2723824-2738613 Arabidopsis thaliana
AT1G08600 5.0kb downstream 5.0kb downstream 5000 false Chr1: 2733614-2738613 Arabidopsis thaliana
AT1G08600 10.0kb upstream 10.0kb upstream 19790 true Chr1: 2713824-2733613 Arabidopsis thaliana
AT1G08600 10.0kb upstream 10.0kb upstream 10000 false Chr1: 2713824-2723823 Arabidopsis thaliana
AT1G08600 10.0kb downstream 10.0kb downstream 19790 true Chr1: 2723824-2743613 Arabidopsis thaliana
AT1G08600 10.0kb downstream 10.0kb downstream 10000 false Chr1: 2733614-2743613 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373021 5261 Brassicaceae View MSA
123830926 5264 Brassicales-Malvales View MSA
124343842 5266 SBM View MSA
124240013 5268 Malvidae View MSA
124061145 5270 Rosid View MSA
123747129 5271 Pentapetalae View MSA
122792246 5272 Eudicot View MSA
122043506 5273 Angiosperm View MSA
121348350 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.979        
cufflinks 1.786        
cufflinks 0.849       Low
cufflinks 2.025       High
cufflinks 0.95        
cufflinks 1.816        

0 Strain