Gene : AT1G48830 A. thaliana TAIR10
Defline:  (1 of 3) K02993 - small subunit ribosomal protein S7e (RP-S7e, RPS7) Genomic Order:  3911
Name:  ? AT1G48830 Secondary Identifier:  ? PAC:19651732
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G48830 0.5kb upstream 0.5kb upstream 2167 true Chr1: 18059636-18061802 Arabidopsis thaliana
AT1G48830 0.5kb upstream 0.5kb upstream 500 false Chr1: 18061303-18061802 Arabidopsis thaliana
AT1G48830 0.5kb downstream 0.5kb downstream 2167 true Chr1: 18059136-18061302 Arabidopsis thaliana
AT1G48830 0.5kb downstream 0.5kb downstream 500 false Chr1: 18059136-18059635 Arabidopsis thaliana
AT1G48830 1.0kb upstream 1.0kb upstream 2667 true Chr1: 18059636-18062302 Arabidopsis thaliana
AT1G48830 1.0kb upstream 1.0kb upstream 1000 false Chr1: 18061303-18062302 Arabidopsis thaliana
AT1G48830 1.0kb downstream 1.0kb downstream 2667 true Chr1: 18058636-18061302 Arabidopsis thaliana
AT1G48830 1.0kb downstream 1.0kb downstream 1000 false Chr1: 18058636-18059635 Arabidopsis thaliana
AT1G48830 2.0kb upstream 2.0kb upstream 3667 true Chr1: 18059636-18063302 Arabidopsis thaliana
AT1G48830 2.0kb upstream 2.0kb upstream 2000 false Chr1: 18061303-18063302 Arabidopsis thaliana
AT1G48830 2.0kb downstream 2.0kb downstream 3667 true Chr1: 18057636-18061302 Arabidopsis thaliana
AT1G48830 2.0kb downstream 2.0kb downstream 2000 false Chr1: 18057636-18059635 Arabidopsis thaliana
AT1G48830 5.0kb upstream 5.0kb upstream 6667 true Chr1: 18059636-18066302 Arabidopsis thaliana
AT1G48830 5.0kb upstream 5.0kb upstream 5000 false Chr1: 18061303-18066302 Arabidopsis thaliana
AT1G48830 5.0kb downstream 5.0kb downstream 6667 true Chr1: 18054636-18061302 Arabidopsis thaliana
AT1G48830 5.0kb downstream 5.0kb downstream 5000 false Chr1: 18054636-18059635 Arabidopsis thaliana
AT1G48830 10.0kb upstream 10.0kb upstream 11667 true Chr1: 18059636-18071302 Arabidopsis thaliana
AT1G48830 10.0kb upstream 10.0kb upstream 10000 false Chr1: 18061303-18071302 Arabidopsis thaliana
AT1G48830 10.0kb downstream 10.0kb downstream 11667 true Chr1: 18049636-18061302 Arabidopsis thaliana
AT1G48830 10.0kb downstream 10.0kb downstream 10000 false Chr1: 18049636-18059635 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377011 5261 Brassicaceae View MSA
123838073 5264 Brassicales-Malvales View MSA
124346750 5266 SBM View MSA
124252671 5268 Malvidae View MSA
124072179 5270 Rosid View MSA
123738806 5271 Pentapetalae View MSA
122790365 5272 Eudicot View MSA
122049624 5273 Angiosperm View MSA
121350369 5274 Embryophyte View MSA
123424764 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.112     High  
cufflinks 35.802     High  
cufflinks 34.204     High  
cufflinks 39.015     High  
cufflinks 29.544     High Low
cufflinks 43.047     High High

0 Strain