Gene : EXLA1 A. thaliana TAIR10
Primary Identifier:  ? AT3G45970 Defline:  (1 of 3) PTHR31692:SF4 - EXPANSIN-LIKE A1-RELATED
Genomic Order:  3580 Name:  ? AT3G45970
Secondary Identifier:  ? PAC:19664844
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5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G45970 0.5kb upstream 0.5kb upstream 1643 true Chr3: 16895666-16897308 Arabidopsis thaliana
AT3G45970 0.5kb upstream 0.5kb upstream 500 false Chr3: 16895666-16896165 Arabidopsis thaliana
AT3G45970 0.5kb downstream 0.5kb downstream 1643 true Chr3: 16896166-16897808 Arabidopsis thaliana
AT3G45970 0.5kb downstream 0.5kb downstream 500 false Chr3: 16897309-16897808 Arabidopsis thaliana
AT3G45970 1.0kb upstream 1.0kb upstream 2143 true Chr3: 16895166-16897308 Arabidopsis thaliana
AT3G45970 1.0kb upstream 1.0kb upstream 1000 false Chr3: 16895166-16896165 Arabidopsis thaliana
AT3G45970 1.0kb downstream 1.0kb downstream 2143 true Chr3: 16896166-16898308 Arabidopsis thaliana
AT3G45970 1.0kb downstream 1.0kb downstream 1000 false Chr3: 16897309-16898308 Arabidopsis thaliana
AT3G45970 2.0kb upstream 2.0kb upstream 3143 true Chr3: 16894166-16897308 Arabidopsis thaliana
AT3G45970 2.0kb upstream 2.0kb upstream 2000 false Chr3: 16894166-16896165 Arabidopsis thaliana
AT3G45970 2.0kb downstream 2.0kb downstream 3143 true Chr3: 16896166-16899308 Arabidopsis thaliana
AT3G45970 2.0kb downstream 2.0kb downstream 2000 false Chr3: 16897309-16899308 Arabidopsis thaliana
AT3G45970 5.0kb upstream 5.0kb upstream 6143 true Chr3: 16891166-16897308 Arabidopsis thaliana
AT3G45970 5.0kb upstream 5.0kb upstream 5000 false Chr3: 16891166-16896165 Arabidopsis thaliana
AT3G45970 5.0kb downstream 5.0kb downstream 6143 true Chr3: 16896166-16902308 Arabidopsis thaliana
AT3G45970 5.0kb downstream 5.0kb downstream 5000 false Chr3: 16897309-16902308 Arabidopsis thaliana
AT3G45970 10.0kb upstream 10.0kb upstream 11143 true Chr3: 16886166-16897308 Arabidopsis thaliana
AT3G45970 10.0kb upstream 10.0kb upstream 10000 false Chr3: 16886166-16896165 Arabidopsis thaliana
AT3G45970 10.0kb downstream 10.0kb downstream 11143 true Chr3: 16896166-16907308 Arabidopsis thaliana
AT3G45970 10.0kb downstream 10.0kb downstream 10000 false Chr3: 16897309-16907308 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376684 5261 Brassicaceae View MSA
123831250 5264 Brassicales-Malvales View MSA
124342054 5266 SBM View MSA
124237005 5268 Malvidae View MSA
124063116 5270 Rosid View MSA
123739587 5271 Pentapetalae View MSA
122785615 5272 Eudicot View MSA
122042929 5273 Angiosperm View MSA
121310045 5274 Embryophyte View MSA
123347644 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 55.36     High  
cufflinks 413.033     High High
cufflinks 51.101     High  
cufflinks 263.066     High  
cufflinks 19.286       Low
cufflinks 381.24     High  

0 Strain