Gene : BT2 A. thaliana TAIR10
Primary Identifier:  ? AT3G48360 Defline:  (1 of 2) PTHR24413//PTHR24413:SF75 - FAMILY NOT NAMED // BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 2
Genomic Order:  3831 Name:  ? AT3G48360
Secondary Identifier:  ? PAC:19658467
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G48360 0.5kb upstream 0.5kb upstream 2834 true Chr3: 17908192-17911025 Arabidopsis thaliana
AT3G48360 0.5kb upstream 0.5kb upstream 500 false Chr3: 17910526-17911025 Arabidopsis thaliana
AT3G48360 0.5kb downstream 0.5kb downstream 2834 true Chr3: 17907692-17910525 Arabidopsis thaliana
AT3G48360 0.5kb downstream 0.5kb downstream 500 false Chr3: 17907692-17908191 Arabidopsis thaliana
AT3G48360 1.0kb upstream 1.0kb upstream 3334 true Chr3: 17908192-17911525 Arabidopsis thaliana
AT3G48360 1.0kb upstream 1.0kb upstream 1000 false Chr3: 17910526-17911525 Arabidopsis thaliana
AT3G48360 1.0kb downstream 1.0kb downstream 3334 true Chr3: 17907192-17910525 Arabidopsis thaliana
AT3G48360 1.0kb downstream 1.0kb downstream 1000 false Chr3: 17907192-17908191 Arabidopsis thaliana
AT3G48360 2.0kb upstream 2.0kb upstream 4334 true Chr3: 17908192-17912525 Arabidopsis thaliana
AT3G48360 2.0kb upstream 2.0kb upstream 2000 false Chr3: 17910526-17912525 Arabidopsis thaliana
AT3G48360 2.0kb downstream 2.0kb downstream 4334 true Chr3: 17906192-17910525 Arabidopsis thaliana
AT3G48360 2.0kb downstream 2.0kb downstream 2000 false Chr3: 17906192-17908191 Arabidopsis thaliana
AT3G48360 5.0kb upstream 5.0kb upstream 7334 true Chr3: 17908192-17915525 Arabidopsis thaliana
AT3G48360 5.0kb upstream 5.0kb upstream 5000 false Chr3: 17910526-17915525 Arabidopsis thaliana
AT3G48360 5.0kb downstream 5.0kb downstream 7334 true Chr3: 17903192-17910525 Arabidopsis thaliana
AT3G48360 5.0kb downstream 5.0kb downstream 5000 false Chr3: 17903192-17908191 Arabidopsis thaliana
AT3G48360 10.0kb upstream 10.0kb upstream 12334 true Chr3: 17908192-17920525 Arabidopsis thaliana
AT3G48360 10.0kb upstream 10.0kb upstream 10000 false Chr3: 17910526-17920525 Arabidopsis thaliana
AT3G48360 10.0kb downstream 10.0kb downstream 12334 true Chr3: 17898192-17910525 Arabidopsis thaliana
AT3G48360 10.0kb downstream 10.0kb downstream 10000 false Chr3: 17898192-17908191 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372583 5261 Brassicaceae View MSA
123840259 5264 Brassicales-Malvales View MSA
124344879 5266 SBM View MSA
124237577 5268 Malvidae View MSA
124063231 5270 Rosid View MSA
123746557 5271 Pentapetalae View MSA
122796772 5272 Eudicot View MSA
122047166 5273 Angiosperm View MSA
121348143 5274 Embryophyte View MSA
123380742 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 145.438     High High
cufflinks 1.128        
cufflinks 20.776        
cufflinks 1.032        
cufflinks 1.793        
cufflinks 34.697     High  

0 Strain