Gene : AT3G27120 A. thaliana TAIR10
Defline:  (1 of 1) PTHR23074//PTHR23074:SF17 - AAA ATPASE // FIDGETIN-LIKE PROTEIN 1 Genomic Order:  2866
Name:  ? AT3G27120 Secondary Identifier:  ? PAC:19663204
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G27120 0.5kb upstream 0.5kb upstream 4121 true Chr3: 9999694-10003814 Arabidopsis thaliana
AT3G27120 0.5kb upstream 0.5kb upstream 500 false Chr3: 10003315-10003814 Arabidopsis thaliana
AT3G27120 0.5kb downstream 0.5kb downstream 4121 true Chr3: 9999194-10003314 Arabidopsis thaliana
AT3G27120 0.5kb downstream 0.5kb downstream 500 false Chr3: 9999194-9999693 Arabidopsis thaliana
AT3G27120 1.0kb upstream 1.0kb upstream 4621 true Chr3: 9999694-10004314 Arabidopsis thaliana
AT3G27120 1.0kb upstream 1.0kb upstream 1000 false Chr3: 10003315-10004314 Arabidopsis thaliana
AT3G27120 1.0kb downstream 1.0kb downstream 4621 true Chr3: 9998694-10003314 Arabidopsis thaliana
AT3G27120 1.0kb downstream 1.0kb downstream 1000 false Chr3: 9998694-9999693 Arabidopsis thaliana
AT3G27120 2.0kb upstream 2.0kb upstream 5621 true Chr3: 9999694-10005314 Arabidopsis thaliana
AT3G27120 2.0kb upstream 2.0kb upstream 2000 false Chr3: 10003315-10005314 Arabidopsis thaliana
AT3G27120 2.0kb downstream 2.0kb downstream 5621 true Chr3: 9997694-10003314 Arabidopsis thaliana
AT3G27120 2.0kb downstream 2.0kb downstream 2000 false Chr3: 9997694-9999693 Arabidopsis thaliana
AT3G27120 5.0kb upstream 5.0kb upstream 8621 true Chr3: 9999694-10008314 Arabidopsis thaliana
AT3G27120 5.0kb upstream 5.0kb upstream 5000 false Chr3: 10003315-10008314 Arabidopsis thaliana
AT3G27120 5.0kb downstream 5.0kb downstream 8621 true Chr3: 9994694-10003314 Arabidopsis thaliana
AT3G27120 5.0kb downstream 5.0kb downstream 5000 false Chr3: 9994694-9999693 Arabidopsis thaliana
AT3G27120 10.0kb upstream 10.0kb upstream 13621 true Chr3: 9999694-10013314 Arabidopsis thaliana
AT3G27120 10.0kb upstream 10.0kb upstream 10000 false Chr3: 10003315-10013314 Arabidopsis thaliana
AT3G27120 10.0kb downstream 10.0kb downstream 13621 true Chr3: 9989694-10003314 Arabidopsis thaliana
AT3G27120 10.0kb downstream 10.0kb downstream 10000 false Chr3: 9989694-9999693 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122330142 5261 Brassicaceae Singleton cluster - no MSA
123771409 5264 Brassicales-Malvales Singleton cluster - no MSA
124346669 5266 SBM View MSA
124247863 5268 Malvidae View MSA
124067039 5270 Rosid View MSA
123739074 5271 Pentapetalae View MSA
122788928 5272 Eudicot View MSA
122047289 5273 Angiosperm View MSA
123428918 5275 Viridiplantae View MSA
121345759 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.349        
cufflinks 1.242       High
cufflinks 0.328        
cufflinks 1.095        
cufflinks 0.191     Low Low
cufflinks 1.016        

0 Strain