Gene : AT3G27470 A. thaliana TAIR10
Defline:  (1 of 11) PF05212 - Protein of unknown function (DUF707) (DUF707) Genomic Order:  2906
Name:  ? AT3G27470 Secondary Identifier:  ? PAC:19664858
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G27470 0.5kb upstream 0.5kb upstream 4359 true Chr3: 10162549-10166907 Arabidopsis thaliana
AT3G27470 0.5kb upstream 0.5kb upstream 500 false Chr3: 10162549-10163048 Arabidopsis thaliana
AT3G27470 0.5kb downstream 0.5kb downstream 4359 true Chr3: 10163049-10167407 Arabidopsis thaliana
AT3G27470 0.5kb downstream 0.5kb downstream 500 false Chr3: 10166908-10167407 Arabidopsis thaliana
AT3G27470 1.0kb upstream 1.0kb upstream 4859 true Chr3: 10162049-10166907 Arabidopsis thaliana
AT3G27470 1.0kb upstream 1.0kb upstream 1000 false Chr3: 10162049-10163048 Arabidopsis thaliana
AT3G27470 1.0kb downstream 1.0kb downstream 4859 true Chr3: 10163049-10167907 Arabidopsis thaliana
AT3G27470 1.0kb downstream 1.0kb downstream 1000 false Chr3: 10166908-10167907 Arabidopsis thaliana
AT3G27470 2.0kb upstream 2.0kb upstream 5859 true Chr3: 10161049-10166907 Arabidopsis thaliana
AT3G27470 2.0kb upstream 2.0kb upstream 2000 false Chr3: 10161049-10163048 Arabidopsis thaliana
AT3G27470 2.0kb downstream 2.0kb downstream 5859 true Chr3: 10163049-10168907 Arabidopsis thaliana
AT3G27470 2.0kb downstream 2.0kb downstream 2000 false Chr3: 10166908-10168907 Arabidopsis thaliana
AT3G27470 5.0kb upstream 5.0kb upstream 8859 true Chr3: 10158049-10166907 Arabidopsis thaliana
AT3G27470 5.0kb upstream 5.0kb upstream 5000 false Chr3: 10158049-10163048 Arabidopsis thaliana
AT3G27470 5.0kb downstream 5.0kb downstream 8859 true Chr3: 10163049-10171907 Arabidopsis thaliana
AT3G27470 5.0kb downstream 5.0kb downstream 5000 false Chr3: 10166908-10171907 Arabidopsis thaliana
AT3G27470 10.0kb upstream 10.0kb upstream 13859 true Chr3: 10153049-10166907 Arabidopsis thaliana
AT3G27470 10.0kb upstream 10.0kb upstream 10000 false Chr3: 10153049-10163048 Arabidopsis thaliana
AT3G27470 10.0kb downstream 10.0kb downstream 13859 true Chr3: 10163049-10176907 Arabidopsis thaliana
AT3G27470 10.0kb downstream 10.0kb downstream 10000 false Chr3: 10166908-10176907 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362716 5261 Brassicaceae View MSA
123838442 5264 Brassicales-Malvales View MSA
124347021 5266 SBM View MSA
124247841 5268 Malvidae View MSA
124068224 5270 Rosid View MSA
123742371 5271 Pentapetalae View MSA
122797381 5272 Eudicot View MSA
122046740 5273 Angiosperm View MSA
121347735 5274 Embryophyte View MSA
123426523 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.846        
cufflinks 3.216       High
cufflinks 1.571       Low
cufflinks 3.375       High
cufflinks 1.698        
cufflinks 2.629        

0 Strain