Sequence Feature Displayer
Ontology Annotation Displayer
1 Pathways
Pathway Identifier | Organism Name | Analysis Method | Analysis Status |
---|---|---|---|
Athaliana TRIGLSYN-PWY | Arabidopsis thaliana | pathologic |
Other
20 Flanking Regions
Region Name | Flank Size | Direction | Length | Gene Included? | Chromosome Location | Organism Name |
---|---|---|---|---|---|---|
AT3G18220 0.5kb upstream | 0.5kb | upstream | 2547 | true | Chr3: 6247414-6249960 | Arabidopsis thaliana |
AT3G18220 0.5kb upstream | 0.5kb | upstream | 500 | false | Chr3: 6247414-6247913 | Arabidopsis thaliana |
AT3G18220 0.5kb downstream | 0.5kb | downstream | 2547 | true | Chr3: 6247914-6250460 | Arabidopsis thaliana |
AT3G18220 0.5kb downstream | 0.5kb | downstream | 500 | false | Chr3: 6249961-6250460 | Arabidopsis thaliana |
AT3G18220 1.0kb upstream | 1.0kb | upstream | 3047 | true | Chr3: 6246914-6249960 | Arabidopsis thaliana |
AT3G18220 1.0kb upstream | 1.0kb | upstream | 1000 | false | Chr3: 6246914-6247913 | Arabidopsis thaliana |
AT3G18220 1.0kb downstream | 1.0kb | downstream | 3047 | true | Chr3: 6247914-6250960 | Arabidopsis thaliana |
AT3G18220 1.0kb downstream | 1.0kb | downstream | 1000 | false | Chr3: 6249961-6250960 | Arabidopsis thaliana |
AT3G18220 2.0kb upstream | 2.0kb | upstream | 4047 | true | Chr3: 6245914-6249960 | Arabidopsis thaliana |
AT3G18220 2.0kb upstream | 2.0kb | upstream | 2000 | false | Chr3: 6245914-6247913 | Arabidopsis thaliana |
AT3G18220 2.0kb downstream | 2.0kb | downstream | 4047 | true | Chr3: 6247914-6251960 | Arabidopsis thaliana |
AT3G18220 2.0kb downstream | 2.0kb | downstream | 2000 | false | Chr3: 6249961-6251960 | Arabidopsis thaliana |
AT3G18220 5.0kb upstream | 5.0kb | upstream | 7047 | true | Chr3: 6242914-6249960 | Arabidopsis thaliana |
AT3G18220 5.0kb upstream | 5.0kb | upstream | 5000 | false | Chr3: 6242914-6247913 | Arabidopsis thaliana |
AT3G18220 5.0kb downstream | 5.0kb | downstream | 7047 | true | Chr3: 6247914-6254960 | Arabidopsis thaliana |
AT3G18220 5.0kb downstream | 5.0kb | downstream | 5000 | false | Chr3: 6249961-6254960 | Arabidopsis thaliana |
AT3G18220 10.0kb upstream | 10.0kb | upstream | 12047 | true | Chr3: 6237914-6249960 | Arabidopsis thaliana |
AT3G18220 10.0kb upstream | 10.0kb | upstream | 10000 | false | Chr3: 6237914-6247913 | Arabidopsis thaliana |
AT3G18220 10.0kb downstream | 10.0kb | downstream | 12047 | true | Chr3: 6247914-6259960 | Arabidopsis thaliana |
AT3G18220 10.0kb downstream | 10.0kb | downstream | 10000 | false | Chr3: 6249961-6259960 | Arabidopsis thaliana |
10 Protein Familys
Cluster ID | Method ID | Method Name | Sequence Alignment |
---|---|---|---|
121779237 | 5273 | Angiosperm | View MSA |
122363360 | 5261 | Brassicaceae | View MSA |
123838860 | 5264 | Brassicales-Malvales | View MSA |
124322508 | 5266 | SBM | View MSA |
124244676 | 5268 | Malvidae | View MSA |
123951996 | 5270 | Rosid | View MSA |
123741413 | 5271 | Pentapetalae | View MSA |
122770045 | 5272 | Eudicot | View MSA |
121350600 | 5274 | Embryophyte | View MSA |
123428329 | 5275 | Viridiplantae | View MSA |
6 Rna Seq Expressionss
Analysis Method | Abundance | Low Confidence Limit | High Confidence Limit | Relative Library Expression | Relative Locus Expression |
---|---|---|---|---|---|
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.007 | Low | |||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.026 | Low | High | ||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.008 | Low |