Gene : UEV1D-4 A. thaliana TAIR10
Primary Identifier:  ? AT3G52560 Defline:  (1 of 2) PTHR24067//PTHR24067:SF117 - UBIQUITIN-CONJUGATING ENZYME E2 // UBIQUITIN-CONJUGATING ENZYME E2 VARIANT 1D
Genomic Order:  4283 Name:  ? AT3G52560
Secondary Identifier:  ? PAC:19664740
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-7511 Arabidopsis thaliana pathologic  

Genomics

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Expression

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Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G52560 0.5kb upstream 0.5kb upstream 2219 true Chr3: 19494377-19496595 Arabidopsis thaliana
AT3G52560 0.5kb upstream 0.5kb upstream 500 false Chr3: 19496096-19496595 Arabidopsis thaliana
AT3G52560 0.5kb downstream 0.5kb downstream 2219 true Chr3: 19493877-19496095 Arabidopsis thaliana
AT3G52560 0.5kb downstream 0.5kb downstream 500 false Chr3: 19493877-19494376 Arabidopsis thaliana
AT3G52560 1.0kb upstream 1.0kb upstream 2719 true Chr3: 19494377-19497095 Arabidopsis thaliana
AT3G52560 1.0kb upstream 1.0kb upstream 1000 false Chr3: 19496096-19497095 Arabidopsis thaliana
AT3G52560 1.0kb downstream 1.0kb downstream 2719 true Chr3: 19493377-19496095 Arabidopsis thaliana
AT3G52560 1.0kb downstream 1.0kb downstream 1000 false Chr3: 19493377-19494376 Arabidopsis thaliana
AT3G52560 2.0kb upstream 2.0kb upstream 3719 true Chr3: 19494377-19498095 Arabidopsis thaliana
AT3G52560 2.0kb upstream 2.0kb upstream 2000 false Chr3: 19496096-19498095 Arabidopsis thaliana
AT3G52560 2.0kb downstream 2.0kb downstream 3719 true Chr3: 19492377-19496095 Arabidopsis thaliana
AT3G52560 2.0kb downstream 2.0kb downstream 2000 false Chr3: 19492377-19494376 Arabidopsis thaliana
AT3G52560 5.0kb upstream 5.0kb upstream 6719 true Chr3: 19494377-19501095 Arabidopsis thaliana
AT3G52560 5.0kb upstream 5.0kb upstream 5000 false Chr3: 19496096-19501095 Arabidopsis thaliana
AT3G52560 5.0kb downstream 5.0kb downstream 6719 true Chr3: 19489377-19496095 Arabidopsis thaliana
AT3G52560 5.0kb downstream 5.0kb downstream 5000 false Chr3: 19489377-19494376 Arabidopsis thaliana
AT3G52560 10.0kb upstream 10.0kb upstream 11719 true Chr3: 19494377-19506095 Arabidopsis thaliana
AT3G52560 10.0kb upstream 10.0kb upstream 10000 false Chr3: 19496096-19506095 Arabidopsis thaliana
AT3G52560 10.0kb downstream 10.0kb downstream 11719 true Chr3: 19484377-19496095 Arabidopsis thaliana
AT3G52560 10.0kb downstream 10.0kb downstream 10000 false Chr3: 19484377-19494376 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380678 5261 Brassicaceae View MSA
123828789 5264 Brassicales-Malvales View MSA
124338488 5266 SBM View MSA
124240521 5268 Malvidae View MSA
124065657 5270 Rosid View MSA
123750389 5271 Pentapetalae View MSA
122794390 5272 Eudicot View MSA
122043594 5273 Angiosperm View MSA
121349017 5274 Embryophyte View MSA
123425410 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.289        
cufflinks 21.539       High
cufflinks 12.472        
cufflinks 19.081        
cufflinks 12.429        
cufflinks 20.01        

0 Strain