Gene : MBF1B A. thaliana TAIR10
Primary Identifier:  ? AT3G58680 Defline:  (1 of 3) K03627 - putative transcription factor (MBF1)
Genomic Order:  4924 Name:  ? AT3G58680
Secondary Identifier:  ? PAC:19659923
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G58680 0.5kb upstream 0.5kb upstream 2136 true Chr3: 21706776-21708911 Arabidopsis thaliana
AT3G58680 0.5kb upstream 0.5kb upstream 500 false Chr3: 21706776-21707275 Arabidopsis thaliana
AT3G58680 0.5kb downstream 0.5kb downstream 2136 true Chr3: 21707276-21709411 Arabidopsis thaliana
AT3G58680 0.5kb downstream 0.5kb downstream 500 false Chr3: 21708912-21709411 Arabidopsis thaliana
AT3G58680 1.0kb upstream 1.0kb upstream 2636 true Chr3: 21706276-21708911 Arabidopsis thaliana
AT3G58680 1.0kb upstream 1.0kb upstream 1000 false Chr3: 21706276-21707275 Arabidopsis thaliana
AT3G58680 1.0kb downstream 1.0kb downstream 2636 true Chr3: 21707276-21709911 Arabidopsis thaliana
AT3G58680 1.0kb downstream 1.0kb downstream 1000 false Chr3: 21708912-21709911 Arabidopsis thaliana
AT3G58680 2.0kb upstream 2.0kb upstream 3636 true Chr3: 21705276-21708911 Arabidopsis thaliana
AT3G58680 2.0kb upstream 2.0kb upstream 2000 false Chr3: 21705276-21707275 Arabidopsis thaliana
AT3G58680 2.0kb downstream 2.0kb downstream 3636 true Chr3: 21707276-21710911 Arabidopsis thaliana
AT3G58680 2.0kb downstream 2.0kb downstream 2000 false Chr3: 21708912-21710911 Arabidopsis thaliana
AT3G58680 5.0kb upstream 5.0kb upstream 6636 true Chr3: 21702276-21708911 Arabidopsis thaliana
AT3G58680 5.0kb upstream 5.0kb upstream 5000 false Chr3: 21702276-21707275 Arabidopsis thaliana
AT3G58680 5.0kb downstream 5.0kb downstream 6636 true Chr3: 21707276-21713911 Arabidopsis thaliana
AT3G58680 5.0kb downstream 5.0kb downstream 5000 false Chr3: 21708912-21713911 Arabidopsis thaliana
AT3G58680 10.0kb upstream 10.0kb upstream 11636 true Chr3: 21697276-21708911 Arabidopsis thaliana
AT3G58680 10.0kb upstream 10.0kb upstream 10000 false Chr3: 21697276-21707275 Arabidopsis thaliana
AT3G58680 10.0kb downstream 10.0kb downstream 11636 true Chr3: 21707276-21718911 Arabidopsis thaliana
AT3G58680 10.0kb downstream 10.0kb downstream 10000 false Chr3: 21708912-21718911 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375656 5261 Brassicaceae View MSA
123839300 5264 Brassicales-Malvales View MSA
124341063 5266 SBM View MSA
124251487 5268 Malvidae View MSA
124061849 5270 Rosid View MSA
123738727 5271 Pentapetalae View MSA
122792809 5272 Eudicot View MSA
122045533 5273 Angiosperm View MSA
121346970 5274 Embryophyte View MSA
123424283 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 83.884     High  
cufflinks 68.284     High  
cufflinks 110.881     High High
cufflinks 66.063     High  
cufflinks 105.841     High High
cufflinks 54.673     High Low

0 Strain