Gene : BGL2 A. thaliana TAIR10
Primary Identifier:  ? AT3G57260 Defline:  (1 of 3) PTHR32227:SF49 - BETA-1,3-GLUCANASE 1-RELATED
Genomic Order:  4780 Name:  ? AT3G57260
Secondary Identifier:  ? PAC:19660269
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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G57260 0.5kb upstream 0.5kb upstream 1843 true Chr3: 21188517-21190359 Arabidopsis thaliana
AT3G57260 0.5kb upstream 0.5kb upstream 500 false Chr3: 21189860-21190359 Arabidopsis thaliana
AT3G57260 0.5kb downstream 0.5kb downstream 1843 true Chr3: 21188017-21189859 Arabidopsis thaliana
AT3G57260 0.5kb downstream 0.5kb downstream 500 false Chr3: 21188017-21188516 Arabidopsis thaliana
AT3G57260 1.0kb upstream 1.0kb upstream 2343 true Chr3: 21188517-21190859 Arabidopsis thaliana
AT3G57260 1.0kb upstream 1.0kb upstream 1000 false Chr3: 21189860-21190859 Arabidopsis thaliana
AT3G57260 1.0kb downstream 1.0kb downstream 2343 true Chr3: 21187517-21189859 Arabidopsis thaliana
AT3G57260 1.0kb downstream 1.0kb downstream 1000 false Chr3: 21187517-21188516 Arabidopsis thaliana
AT3G57260 2.0kb upstream 2.0kb upstream 3343 true Chr3: 21188517-21191859 Arabidopsis thaliana
AT3G57260 2.0kb upstream 2.0kb upstream 2000 false Chr3: 21189860-21191859 Arabidopsis thaliana
AT3G57260 2.0kb downstream 2.0kb downstream 3343 true Chr3: 21186517-21189859 Arabidopsis thaliana
AT3G57260 2.0kb downstream 2.0kb downstream 2000 false Chr3: 21186517-21188516 Arabidopsis thaliana
AT3G57260 5.0kb upstream 5.0kb upstream 6343 true Chr3: 21188517-21194859 Arabidopsis thaliana
AT3G57260 5.0kb upstream 5.0kb upstream 5000 false Chr3: 21189860-21194859 Arabidopsis thaliana
AT3G57260 5.0kb downstream 5.0kb downstream 6343 true Chr3: 21183517-21189859 Arabidopsis thaliana
AT3G57260 5.0kb downstream 5.0kb downstream 5000 false Chr3: 21183517-21188516 Arabidopsis thaliana
AT3G57260 10.0kb upstream 10.0kb upstream 11343 true Chr3: 21188517-21199859 Arabidopsis thaliana
AT3G57260 10.0kb upstream 10.0kb upstream 10000 false Chr3: 21189860-21199859 Arabidopsis thaliana
AT3G57260 10.0kb downstream 10.0kb downstream 11343 true Chr3: 21178517-21189859 Arabidopsis thaliana
AT3G57260 10.0kb downstream 10.0kb downstream 10000 false Chr3: 21178517-21188516 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375569 5261 Brassicaceae View MSA
123835945 5264 Brassicales-Malvales View MSA
124347459 5266 SBM View MSA
124248402 5268 Malvidae View MSA
124073556 5270 Rosid View MSA
123753144 5271 Pentapetalae View MSA
122796626 5272 Eudicot View MSA
122051222 5273 Angiosperm View MSA
121351779 5274 Embryophyte View MSA
123382322 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 929.773     High High
cufflinks 7.922        
cufflinks 90.73     High  
cufflinks 7.39        
cufflinks 341.889     High  
cufflinks 1.767       Low

0 Strain