Gene : AT3G19100 A. thaliana TAIR10
Defline:  (1 of 3) PTHR24349//PTHR24349:SF115 - SERINE/THREONINE-PROTEIN KINASE // SUBFAMILY NOT NAMED Genomic Order:  1981
Name:  ? AT3G19100 Secondary Identifier:  ? PAC:19659529
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G19100 0.5kb upstream 0.5kb upstream 4320 true Chr3: 6604976-6609295 Arabidopsis thaliana
AT3G19100 0.5kb upstream 0.5kb upstream 500 false Chr3: 6604976-6605475 Arabidopsis thaliana
AT3G19100 0.5kb downstream 0.5kb downstream 4320 true Chr3: 6605476-6609795 Arabidopsis thaliana
AT3G19100 0.5kb downstream 0.5kb downstream 500 false Chr3: 6609296-6609795 Arabidopsis thaliana
AT3G19100 1.0kb upstream 1.0kb upstream 4820 true Chr3: 6604476-6609295 Arabidopsis thaliana
AT3G19100 1.0kb upstream 1.0kb upstream 1000 false Chr3: 6604476-6605475 Arabidopsis thaliana
AT3G19100 1.0kb downstream 1.0kb downstream 4820 true Chr3: 6605476-6610295 Arabidopsis thaliana
AT3G19100 1.0kb downstream 1.0kb downstream 1000 false Chr3: 6609296-6610295 Arabidopsis thaliana
AT3G19100 2.0kb upstream 2.0kb upstream 5820 true Chr3: 6603476-6609295 Arabidopsis thaliana
AT3G19100 2.0kb upstream 2.0kb upstream 2000 false Chr3: 6603476-6605475 Arabidopsis thaliana
AT3G19100 2.0kb downstream 2.0kb downstream 5820 true Chr3: 6605476-6611295 Arabidopsis thaliana
AT3G19100 2.0kb downstream 2.0kb downstream 2000 false Chr3: 6609296-6611295 Arabidopsis thaliana
AT3G19100 5.0kb upstream 5.0kb upstream 8820 true Chr3: 6600476-6609295 Arabidopsis thaliana
AT3G19100 5.0kb upstream 5.0kb upstream 5000 false Chr3: 6600476-6605475 Arabidopsis thaliana
AT3G19100 5.0kb downstream 5.0kb downstream 8820 true Chr3: 6605476-6614295 Arabidopsis thaliana
AT3G19100 5.0kb downstream 5.0kb downstream 5000 false Chr3: 6609296-6614295 Arabidopsis thaliana
AT3G19100 10.0kb upstream 10.0kb upstream 13820 true Chr3: 6595476-6609295 Arabidopsis thaliana
AT3G19100 10.0kb upstream 10.0kb upstream 10000 false Chr3: 6595476-6605475 Arabidopsis thaliana
AT3G19100 10.0kb downstream 10.0kb downstream 13820 true Chr3: 6605476-6619295 Arabidopsis thaliana
AT3G19100 10.0kb downstream 10.0kb downstream 10000 false Chr3: 6609296-6619295 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379045 5261 Brassicaceae View MSA
123837101 5264 Brassicales-Malvales View MSA
124322241 5266 SBM View MSA
124251418 5268 Malvidae View MSA
124071242 5270 Rosid View MSA
123749473 5271 Pentapetalae View MSA
122789222 5272 Eudicot View MSA
122047045 5273 Angiosperm View MSA
121343860 5274 Embryophyte View MSA
123379933 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.11        
cufflinks 15.051        
cufflinks 15.013        
cufflinks 22.269       High
cufflinks 10.683       Low
cufflinks 17.928        

0 Strain