Gene : RBP47B A. thaliana TAIR10
Primary Identifier:  ? AT3G19130 Defline:  (1 of 4) PTHR24012:SF403 - POLYADENYLATE-BINDING PROTEIN RBP47A
Genomic Order:  1983 Name:  ? AT3G19130
Secondary Identifier:  ? PAC:19663380
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G19130 0.5kb upstream 0.5kb upstream 3347 true Chr3: 6611198-6614544 Arabidopsis thaliana
AT3G19130 0.5kb upstream 0.5kb upstream 500 false Chr3: 6614045-6614544 Arabidopsis thaliana
AT3G19130 0.5kb downstream 0.5kb downstream 3347 true Chr3: 6610698-6614044 Arabidopsis thaliana
AT3G19130 0.5kb downstream 0.5kb downstream 500 false Chr3: 6610698-6611197 Arabidopsis thaliana
AT3G19130 1.0kb upstream 1.0kb upstream 3847 true Chr3: 6611198-6615044 Arabidopsis thaliana
AT3G19130 1.0kb upstream 1.0kb upstream 1000 false Chr3: 6614045-6615044 Arabidopsis thaliana
AT3G19130 1.0kb downstream 1.0kb downstream 3847 true Chr3: 6610198-6614044 Arabidopsis thaliana
AT3G19130 1.0kb downstream 1.0kb downstream 1000 false Chr3: 6610198-6611197 Arabidopsis thaliana
AT3G19130 2.0kb upstream 2.0kb upstream 4847 true Chr3: 6611198-6616044 Arabidopsis thaliana
AT3G19130 2.0kb upstream 2.0kb upstream 2000 false Chr3: 6614045-6616044 Arabidopsis thaliana
AT3G19130 2.0kb downstream 2.0kb downstream 4847 true Chr3: 6609198-6614044 Arabidopsis thaliana
AT3G19130 2.0kb downstream 2.0kb downstream 2000 false Chr3: 6609198-6611197 Arabidopsis thaliana
AT3G19130 5.0kb upstream 5.0kb upstream 7847 true Chr3: 6611198-6619044 Arabidopsis thaliana
AT3G19130 5.0kb upstream 5.0kb upstream 5000 false Chr3: 6614045-6619044 Arabidopsis thaliana
AT3G19130 5.0kb downstream 5.0kb downstream 7847 true Chr3: 6606198-6614044 Arabidopsis thaliana
AT3G19130 5.0kb downstream 5.0kb downstream 5000 false Chr3: 6606198-6611197 Arabidopsis thaliana
AT3G19130 10.0kb upstream 10.0kb upstream 12847 true Chr3: 6611198-6624044 Arabidopsis thaliana
AT3G19130 10.0kb upstream 10.0kb upstream 10000 false Chr3: 6614045-6624044 Arabidopsis thaliana
AT3G19130 10.0kb downstream 10.0kb downstream 12847 true Chr3: 6601198-6614044 Arabidopsis thaliana
AT3G19130 10.0kb downstream 10.0kb downstream 10000 false Chr3: 6601198-6611197 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361350 5261 Brassicaceae View MSA
123835905 5264 Brassicales-Malvales View MSA
124337966 5266 SBM View MSA
124243321 5268 Malvidae View MSA
124065696 5270 Rosid View MSA
123744612 5271 Pentapetalae View MSA
122796677 5272 Eudicot View MSA
122051452 5273 Angiosperm View MSA
121351371 5274 Embryophyte View MSA
123424048 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.863        
cufflinks 55.773     High  
cufflinks 13.618        
cufflinks 49.513     High  
cufflinks 13.869        
cufflinks 64.391     High High

0 Strain