Gene : RAD54 A. thaliana TAIR10
Primary Identifier:  ? AT3G19210 Defline:  (1 of 7) K10875 - DNA repair and recombination protein RAD54 and RAD54-like protein (RAD54L, RAD54)
Genomic Order:  1992 Name:  ? AT3G19210
Secondary Identifier:  ? PAC:19665230
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G19210 0.5kb upstream 0.5kb upstream 6744 true Chr3: 6652745-6659488 Arabidopsis thaliana
AT3G19210 0.5kb upstream 0.5kb upstream 500 false Chr3: 6658989-6659488 Arabidopsis thaliana
AT3G19210 0.5kb downstream 0.5kb downstream 6744 true Chr3: 6652245-6658988 Arabidopsis thaliana
AT3G19210 0.5kb downstream 0.5kb downstream 500 false Chr3: 6652245-6652744 Arabidopsis thaliana
AT3G19210 1.0kb upstream 1.0kb upstream 7244 true Chr3: 6652745-6659988 Arabidopsis thaliana
AT3G19210 1.0kb upstream 1.0kb upstream 1000 false Chr3: 6658989-6659988 Arabidopsis thaliana
AT3G19210 1.0kb downstream 1.0kb downstream 7244 true Chr3: 6651745-6658988 Arabidopsis thaliana
AT3G19210 1.0kb downstream 1.0kb downstream 1000 false Chr3: 6651745-6652744 Arabidopsis thaliana
AT3G19210 2.0kb upstream 2.0kb upstream 8244 true Chr3: 6652745-6660988 Arabidopsis thaliana
AT3G19210 2.0kb upstream 2.0kb upstream 2000 false Chr3: 6658989-6660988 Arabidopsis thaliana
AT3G19210 2.0kb downstream 2.0kb downstream 8244 true Chr3: 6650745-6658988 Arabidopsis thaliana
AT3G19210 2.0kb downstream 2.0kb downstream 2000 false Chr3: 6650745-6652744 Arabidopsis thaliana
AT3G19210 5.0kb upstream 5.0kb upstream 11244 true Chr3: 6652745-6663988 Arabidopsis thaliana
AT3G19210 5.0kb upstream 5.0kb upstream 5000 false Chr3: 6658989-6663988 Arabidopsis thaliana
AT3G19210 5.0kb downstream 5.0kb downstream 11244 true Chr3: 6647745-6658988 Arabidopsis thaliana
AT3G19210 5.0kb downstream 5.0kb downstream 5000 false Chr3: 6647745-6652744 Arabidopsis thaliana
AT3G19210 10.0kb upstream 10.0kb upstream 16244 true Chr3: 6652745-6668988 Arabidopsis thaliana
AT3G19210 10.0kb upstream 10.0kb upstream 10000 false Chr3: 6658989-6668988 Arabidopsis thaliana
AT3G19210 10.0kb downstream 10.0kb downstream 16244 true Chr3: 6642745-6658988 Arabidopsis thaliana
AT3G19210 10.0kb downstream 10.0kb downstream 10000 false Chr3: 6642745-6652744 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363877 5261 Brassicaceae View MSA
123833355 5264 Brassicales-Malvales View MSA
124345572 5266 SBM View MSA
124240545 5268 Malvidae View MSA
124063199 5270 Rosid View MSA
123739841 5271 Pentapetalae View MSA
122786918 5272 Eudicot View MSA
122047052 5273 Angiosperm View MSA
121348350 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.356        
cufflinks 0.66        
cufflinks 0.28        
cufflinks 0.73       High
cufflinks 0.249       Low
cufflinks 0.49        

0 Strain