Gene : OVA5 A. thaliana TAIR10
Primary Identifier:  ? AT3G13490 Defline:  (1 of 1) PTHR22594//PTHR22594:SF20 - ASPARTYL/LYSYL-TRNA SYNTHETASE // LYSINE--TRNA LIGASE
Genomic Order:  1351 Name:  ? AT3G13490
Secondary Identifier:  ? PAC:19662507
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana TRNA-CHARGING-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G13490 0.5kb upstream 0.5kb upstream 4101 true Chr3: 4395725-4399825 Arabidopsis thaliana
AT3G13490 0.5kb upstream 0.5kb upstream 500 false Chr3: 4399326-4399825 Arabidopsis thaliana
AT3G13490 0.5kb downstream 0.5kb downstream 4101 true Chr3: 4395225-4399325 Arabidopsis thaliana
AT3G13490 0.5kb downstream 0.5kb downstream 500 false Chr3: 4395225-4395724 Arabidopsis thaliana
AT3G13490 1.0kb upstream 1.0kb upstream 4601 true Chr3: 4395725-4400325 Arabidopsis thaliana
AT3G13490 1.0kb upstream 1.0kb upstream 1000 false Chr3: 4399326-4400325 Arabidopsis thaliana
AT3G13490 1.0kb downstream 1.0kb downstream 4601 true Chr3: 4394725-4399325 Arabidopsis thaliana
AT3G13490 1.0kb downstream 1.0kb downstream 1000 false Chr3: 4394725-4395724 Arabidopsis thaliana
AT3G13490 2.0kb upstream 2.0kb upstream 5601 true Chr3: 4395725-4401325 Arabidopsis thaliana
AT3G13490 2.0kb upstream 2.0kb upstream 2000 false Chr3: 4399326-4401325 Arabidopsis thaliana
AT3G13490 2.0kb downstream 2.0kb downstream 5601 true Chr3: 4393725-4399325 Arabidopsis thaliana
AT3G13490 2.0kb downstream 2.0kb downstream 2000 false Chr3: 4393725-4395724 Arabidopsis thaliana
AT3G13490 5.0kb upstream 5.0kb upstream 8601 true Chr3: 4395725-4404325 Arabidopsis thaliana
AT3G13490 5.0kb upstream 5.0kb upstream 5000 false Chr3: 4399326-4404325 Arabidopsis thaliana
AT3G13490 5.0kb downstream 5.0kb downstream 8601 true Chr3: 4390725-4399325 Arabidopsis thaliana
AT3G13490 5.0kb downstream 5.0kb downstream 5000 false Chr3: 4390725-4395724 Arabidopsis thaliana
AT3G13490 10.0kb upstream 10.0kb upstream 13601 true Chr3: 4395725-4409325 Arabidopsis thaliana
AT3G13490 10.0kb upstream 10.0kb upstream 10000 false Chr3: 4399326-4409325 Arabidopsis thaliana
AT3G13490 10.0kb downstream 10.0kb downstream 13601 true Chr3: 4385725-4399325 Arabidopsis thaliana
AT3G13490 10.0kb downstream 10.0kb downstream 10000 false Chr3: 4385725-4395724 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363133 5261 Brassicaceae View MSA
123829318 5264 Brassicales-Malvales View MSA
124344689 5266 SBM View MSA
124239048 5268 Malvidae View MSA
124063653 5270 Rosid View MSA
123739204 5271 Pentapetalae View MSA
122788489 5272 Eudicot View MSA
122044302 5273 Angiosperm View MSA
121346599 5274 Embryophyte View MSA
123423817 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.017        
cufflinks 7.564        
cufflinks 19.626       High
cufflinks 7.783        
cufflinks 17.166        
cufflinks 7.691        

0 Strain