Gene : AT3G27950 A. thaliana TAIR10
Defline:  (1 of 1) PTHR22835//PTHR22835:SF239 - ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  2959
Name:  ? AT3G27950 Secondary Identifier:  ? PAC:19661388
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G27950 0.5kb upstream 0.5kb upstream 2349 true Chr3: 10377548-10379896 Arabidopsis thaliana
AT3G27950 0.5kb upstream 0.5kb upstream 500 false Chr3: 10377548-10378047 Arabidopsis thaliana
AT3G27950 0.5kb downstream 0.5kb downstream 2349 true Chr3: 10378048-10380396 Arabidopsis thaliana
AT3G27950 0.5kb downstream 0.5kb downstream 500 false Chr3: 10379897-10380396 Arabidopsis thaliana
AT3G27950 1.0kb upstream 1.0kb upstream 2849 true Chr3: 10377048-10379896 Arabidopsis thaliana
AT3G27950 1.0kb upstream 1.0kb upstream 1000 false Chr3: 10377048-10378047 Arabidopsis thaliana
AT3G27950 1.0kb downstream 1.0kb downstream 2849 true Chr3: 10378048-10380896 Arabidopsis thaliana
AT3G27950 1.0kb downstream 1.0kb downstream 1000 false Chr3: 10379897-10380896 Arabidopsis thaliana
AT3G27950 2.0kb upstream 2.0kb upstream 3849 true Chr3: 10376048-10379896 Arabidopsis thaliana
AT3G27950 2.0kb upstream 2.0kb upstream 2000 false Chr3: 10376048-10378047 Arabidopsis thaliana
AT3G27950 2.0kb downstream 2.0kb downstream 3849 true Chr3: 10378048-10381896 Arabidopsis thaliana
AT3G27950 2.0kb downstream 2.0kb downstream 2000 false Chr3: 10379897-10381896 Arabidopsis thaliana
AT3G27950 5.0kb upstream 5.0kb upstream 6849 true Chr3: 10373048-10379896 Arabidopsis thaliana
AT3G27950 5.0kb upstream 5.0kb upstream 5000 false Chr3: 10373048-10378047 Arabidopsis thaliana
AT3G27950 5.0kb downstream 5.0kb downstream 6849 true Chr3: 10378048-10384896 Arabidopsis thaliana
AT3G27950 5.0kb downstream 5.0kb downstream 5000 false Chr3: 10379897-10384896 Arabidopsis thaliana
AT3G27950 10.0kb upstream 10.0kb upstream 11849 true Chr3: 10368048-10379896 Arabidopsis thaliana
AT3G27950 10.0kb upstream 10.0kb upstream 10000 false Chr3: 10368048-10378047 Arabidopsis thaliana
AT3G27950 10.0kb downstream 10.0kb downstream 11849 true Chr3: 10378048-10389896 Arabidopsis thaliana
AT3G27950 10.0kb downstream 10.0kb downstream 10000 false Chr3: 10379897-10389896 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370914 5261 Brassicaceae View MSA
123833483 5264 Brassicales-Malvales View MSA
124337157 5266 SBM View MSA
124244531 5268 Malvidae View MSA
124074117 5270 Rosid View MSA
123751709 5271 Pentapetalae View MSA
122792759 5272 Eudicot View MSA
122045823 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.008     Low Low
cufflinks 0.139     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.096     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.138     Low  

0 Strain