Gene : AT3G28840 A. thaliana TAIR10
Defline:  (1 of 11) PF06746 - Protein of unknown function (DUF1216) (DUF1216) Genomic Order:  3053
Name:  ? AT3G28840 Secondary Identifier:  ? PAC:19661250
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G28840 0.5kb upstream 0.5kb upstream 2038 true Chr3: 10837909-10839946 Arabidopsis thaliana
AT3G28840 0.5kb upstream 0.5kb upstream 500 false Chr3: 10837909-10838408 Arabidopsis thaliana
AT3G28840 0.5kb downstream 0.5kb downstream 2038 true Chr3: 10838409-10840446 Arabidopsis thaliana
AT3G28840 0.5kb downstream 0.5kb downstream 500 false Chr3: 10839947-10840446 Arabidopsis thaliana
AT3G28840 1.0kb upstream 1.0kb upstream 2538 true Chr3: 10837409-10839946 Arabidopsis thaliana
AT3G28840 1.0kb upstream 1.0kb upstream 1000 false Chr3: 10837409-10838408 Arabidopsis thaliana
AT3G28840 1.0kb downstream 1.0kb downstream 2538 true Chr3: 10838409-10840946 Arabidopsis thaliana
AT3G28840 1.0kb downstream 1.0kb downstream 1000 false Chr3: 10839947-10840946 Arabidopsis thaliana
AT3G28840 2.0kb upstream 2.0kb upstream 3538 true Chr3: 10836409-10839946 Arabidopsis thaliana
AT3G28840 2.0kb upstream 2.0kb upstream 2000 false Chr3: 10836409-10838408 Arabidopsis thaliana
AT3G28840 2.0kb downstream 2.0kb downstream 3538 true Chr3: 10838409-10841946 Arabidopsis thaliana
AT3G28840 2.0kb downstream 2.0kb downstream 2000 false Chr3: 10839947-10841946 Arabidopsis thaliana
AT3G28840 5.0kb upstream 5.0kb upstream 6538 true Chr3: 10833409-10839946 Arabidopsis thaliana
AT3G28840 5.0kb upstream 5.0kb upstream 5000 false Chr3: 10833409-10838408 Arabidopsis thaliana
AT3G28840 5.0kb downstream 5.0kb downstream 6538 true Chr3: 10838409-10844946 Arabidopsis thaliana
AT3G28840 5.0kb downstream 5.0kb downstream 5000 false Chr3: 10839947-10844946 Arabidopsis thaliana
AT3G28840 10.0kb upstream 10.0kb upstream 11538 true Chr3: 10828409-10839946 Arabidopsis thaliana
AT3G28840 10.0kb upstream 10.0kb upstream 10000 false Chr3: 10828409-10838408 Arabidopsis thaliana
AT3G28840 10.0kb downstream 10.0kb downstream 11538 true Chr3: 10838409-10849946 Arabidopsis thaliana
AT3G28840 10.0kb downstream 10.0kb downstream 10000 false Chr3: 10839947-10849946 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510827 5273 Angiosperm View MSA
122368648 5261 Brassicaceae View MSA
123799628 5264 Brassicales-Malvales View MSA
124297130 5266 SBM View MSA
124149097 5268 Malvidae View MSA
123874972 5270 Rosid View MSA
123458868 5271 Pentapetalae View MSA
122494266 5272 Eudicot View MSA
120783903 5274 Embryophyte View MSA
122825863 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.382        
cufflinks 0.338     Low  
cufflinks 0.452        
cufflinks 0.292     Low Low
cufflinks 0.731       High
cufflinks 0.501        

0 Strain