Gene : GH9A4 A. thaliana TAIR10
Primary Identifier:  ? AT3G43860 Defline:  (1 of 1) PTHR22298//PTHR22298:SF31 - ENDO-1,4-BETA-GLUCANASE // ENDOGLUCANASE 16
Genomic Order:  3359 Name:  ? AT3G43860
Secondary Identifier:  ? PAC:19659507
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G43860 0.5kb upstream 0.5kb upstream 3296 true Chr3: 15706494-15709789 Arabidopsis thaliana
AT3G43860 0.5kb upstream 0.5kb upstream 500 false Chr3: 15706494-15706993 Arabidopsis thaliana
AT3G43860 0.5kb downstream 0.5kb downstream 3296 true Chr3: 15706994-15710289 Arabidopsis thaliana
AT3G43860 0.5kb downstream 0.5kb downstream 500 false Chr3: 15709790-15710289 Arabidopsis thaliana
AT3G43860 1.0kb upstream 1.0kb upstream 3796 true Chr3: 15705994-15709789 Arabidopsis thaliana
AT3G43860 1.0kb upstream 1.0kb upstream 1000 false Chr3: 15705994-15706993 Arabidopsis thaliana
AT3G43860 1.0kb downstream 1.0kb downstream 3796 true Chr3: 15706994-15710789 Arabidopsis thaliana
AT3G43860 1.0kb downstream 1.0kb downstream 1000 false Chr3: 15709790-15710789 Arabidopsis thaliana
AT3G43860 2.0kb upstream 2.0kb upstream 4796 true Chr3: 15704994-15709789 Arabidopsis thaliana
AT3G43860 2.0kb upstream 2.0kb upstream 2000 false Chr3: 15704994-15706993 Arabidopsis thaliana
AT3G43860 2.0kb downstream 2.0kb downstream 4796 true Chr3: 15706994-15711789 Arabidopsis thaliana
AT3G43860 2.0kb downstream 2.0kb downstream 2000 false Chr3: 15709790-15711789 Arabidopsis thaliana
AT3G43860 5.0kb upstream 5.0kb upstream 7796 true Chr3: 15701994-15709789 Arabidopsis thaliana
AT3G43860 5.0kb upstream 5.0kb upstream 5000 false Chr3: 15701994-15706993 Arabidopsis thaliana
AT3G43860 5.0kb downstream 5.0kb downstream 7796 true Chr3: 15706994-15714789 Arabidopsis thaliana
AT3G43860 5.0kb downstream 5.0kb downstream 5000 false Chr3: 15709790-15714789 Arabidopsis thaliana
AT3G43860 10.0kb upstream 10.0kb upstream 12796 true Chr3: 15696994-15709789 Arabidopsis thaliana
AT3G43860 10.0kb upstream 10.0kb upstream 10000 false Chr3: 15696994-15706993 Arabidopsis thaliana
AT3G43860 10.0kb downstream 10.0kb downstream 12796 true Chr3: 15706994-15719789 Arabidopsis thaliana
AT3G43860 10.0kb downstream 10.0kb downstream 10000 false Chr3: 15709790-15719789 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368820 5261 Brassicaceae View MSA
123833748 5264 Brassicales-Malvales View MSA
124350231 5266 SBM View MSA
124238068 5268 Malvidae View MSA
124063472 5270 Rosid View MSA
123746243 5271 Pentapetalae View MSA
122789344 5272 Eudicot View MSA
122042866 5273 Angiosperm View MSA
121349892 5274 Embryophyte View MSA
123381487 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  

0 Strain