Gene : AT3G23470 A. thaliana TAIR10
Defline:  (1 of 4) 2.1.1.79 - Cyclopropane-fatty-acyl-phospholipid synthase / Unsaturated-phospholipid methyltransferase Genomic Order:  2463
Name:  ? AT3G23470 Secondary Identifier:  ? PAC:19660489
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-4942 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G23470 0.5kb upstream 0.5kb upstream 3956 true Chr3: 8414210-8418165 Arabidopsis thaliana
AT3G23470 0.5kb upstream 0.5kb upstream 500 false Chr3: 8414210-8414709 Arabidopsis thaliana
AT3G23470 0.5kb downstream 0.5kb downstream 3956 true Chr3: 8414710-8418665 Arabidopsis thaliana
AT3G23470 0.5kb downstream 0.5kb downstream 500 false Chr3: 8418166-8418665 Arabidopsis thaliana
AT3G23470 1.0kb upstream 1.0kb upstream 4456 true Chr3: 8413710-8418165 Arabidopsis thaliana
AT3G23470 1.0kb upstream 1.0kb upstream 1000 false Chr3: 8413710-8414709 Arabidopsis thaliana
AT3G23470 1.0kb downstream 1.0kb downstream 4456 true Chr3: 8414710-8419165 Arabidopsis thaliana
AT3G23470 1.0kb downstream 1.0kb downstream 1000 false Chr3: 8418166-8419165 Arabidopsis thaliana
AT3G23470 2.0kb upstream 2.0kb upstream 5456 true Chr3: 8412710-8418165 Arabidopsis thaliana
AT3G23470 2.0kb upstream 2.0kb upstream 2000 false Chr3: 8412710-8414709 Arabidopsis thaliana
AT3G23470 2.0kb downstream 2.0kb downstream 5456 true Chr3: 8414710-8420165 Arabidopsis thaliana
AT3G23470 2.0kb downstream 2.0kb downstream 2000 false Chr3: 8418166-8420165 Arabidopsis thaliana
AT3G23470 5.0kb upstream 5.0kb upstream 8456 true Chr3: 8409710-8418165 Arabidopsis thaliana
AT3G23470 5.0kb upstream 5.0kb upstream 5000 false Chr3: 8409710-8414709 Arabidopsis thaliana
AT3G23470 5.0kb downstream 5.0kb downstream 8456 true Chr3: 8414710-8423165 Arabidopsis thaliana
AT3G23470 5.0kb downstream 5.0kb downstream 5000 false Chr3: 8418166-8423165 Arabidopsis thaliana
AT3G23470 10.0kb upstream 10.0kb upstream 13456 true Chr3: 8404710-8418165 Arabidopsis thaliana
AT3G23470 10.0kb upstream 10.0kb upstream 10000 false Chr3: 8404710-8414709 Arabidopsis thaliana
AT3G23470 10.0kb downstream 10.0kb downstream 13456 true Chr3: 8414710-8428165 Arabidopsis thaliana
AT3G23470 10.0kb downstream 10.0kb downstream 10000 false Chr3: 8418166-8428165 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378227 5261 Brassicaceae View MSA
123836708 5264 Brassicales-Malvales View MSA
124347136 5266 SBM View MSA
124247291 5268 Malvidae View MSA
124064151 5270 Rosid View MSA
123753526 5271 Pentapetalae View MSA
122793663 5272 Eudicot View MSA
122044798 5273 Angiosperm View MSA
121344638 5274 Embryophyte View MSA
123426651 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.219     Low  
cufflinks 2.088        
cufflinks 0.166     Low Low
cufflinks 5.711       High
cufflinks 0.235     Low  
cufflinks 5.277       High

0 Strain