Gene : HCF101 A. thaliana TAIR10
Primary Identifier:  ? AT3G24430 Defline:  (1 of 1) PTHR23264//PTHR23264:SF29 - NUCLEOTIDE-BINDING PROTEIN NBP35 YEAST -RELATED // PROTEIN HIGH CHLOROPHYLL FLUORESCENCE 101
Genomic Order:  2567 Name:  ? AT3G24430
Secondary Identifier:  ? PAC:19663690
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G24430 0.5kb upstream 0.5kb upstream 4119 true Chr3: 8868583-8872701 Arabidopsis thaliana
AT3G24430 0.5kb upstream 0.5kb upstream 500 false Chr3: 8872202-8872701 Arabidopsis thaliana
AT3G24430 0.5kb downstream 0.5kb downstream 4119 true Chr3: 8868083-8872201 Arabidopsis thaliana
AT3G24430 0.5kb downstream 0.5kb downstream 500 false Chr3: 8868083-8868582 Arabidopsis thaliana
AT3G24430 1.0kb upstream 1.0kb upstream 4619 true Chr3: 8868583-8873201 Arabidopsis thaliana
AT3G24430 1.0kb upstream 1.0kb upstream 1000 false Chr3: 8872202-8873201 Arabidopsis thaliana
AT3G24430 1.0kb downstream 1.0kb downstream 4619 true Chr3: 8867583-8872201 Arabidopsis thaliana
AT3G24430 1.0kb downstream 1.0kb downstream 1000 false Chr3: 8867583-8868582 Arabidopsis thaliana
AT3G24430 2.0kb upstream 2.0kb upstream 5619 true Chr3: 8868583-8874201 Arabidopsis thaliana
AT3G24430 2.0kb upstream 2.0kb upstream 2000 false Chr3: 8872202-8874201 Arabidopsis thaliana
AT3G24430 2.0kb downstream 2.0kb downstream 5619 true Chr3: 8866583-8872201 Arabidopsis thaliana
AT3G24430 2.0kb downstream 2.0kb downstream 2000 false Chr3: 8866583-8868582 Arabidopsis thaliana
AT3G24430 5.0kb upstream 5.0kb upstream 8619 true Chr3: 8868583-8877201 Arabidopsis thaliana
AT3G24430 5.0kb upstream 5.0kb upstream 5000 false Chr3: 8872202-8877201 Arabidopsis thaliana
AT3G24430 5.0kb downstream 5.0kb downstream 8619 true Chr3: 8863583-8872201 Arabidopsis thaliana
AT3G24430 5.0kb downstream 5.0kb downstream 5000 false Chr3: 8863583-8868582 Arabidopsis thaliana
AT3G24430 10.0kb upstream 10.0kb upstream 13619 true Chr3: 8868583-8882201 Arabidopsis thaliana
AT3G24430 10.0kb upstream 10.0kb upstream 10000 false Chr3: 8872202-8882201 Arabidopsis thaliana
AT3G24430 10.0kb downstream 10.0kb downstream 13619 true Chr3: 8858583-8872201 Arabidopsis thaliana
AT3G24430 10.0kb downstream 10.0kb downstream 10000 false Chr3: 8858583-8868582 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369643 5261 Brassicaceae View MSA
123830278 5264 Brassicales-Malvales View MSA
124346591 5266 SBM View MSA
124240299 5268 Malvidae View MSA
124072691 5270 Rosid View MSA
123738280 5271 Pentapetalae View MSA
122788075 5272 Eudicot View MSA
122042012 5273 Angiosperm View MSA
121347144 5274 Embryophyte View MSA
123424457 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.667     High  
cufflinks 1.845        
cufflinks 37.407     High  
cufflinks 1.782        
cufflinks 33.343     High  
cufflinks 2.067        

0 Strain