Gene : AT3G02760 A. thaliana TAIR10
Defline:  (1 of 1) PTHR11476:SF7 - HISTIDYL-TRNA SYNTHETASE, ISOFORM D Genomic Order:  204
Name:  ? AT3G02760 Secondary Identifier:  ? PAC:19664037
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana TRNA-CHARGING-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G02760 0.5kb upstream 0.5kb upstream 3792 true Chr3: 597359-601150 Arabidopsis thaliana
AT3G02760 0.5kb upstream 0.5kb upstream 500 false Chr3: 600651-601150 Arabidopsis thaliana
AT3G02760 0.5kb downstream 0.5kb downstream 3792 true Chr3: 596859-600650 Arabidopsis thaliana
AT3G02760 0.5kb downstream 0.5kb downstream 500 false Chr3: 596859-597358 Arabidopsis thaliana
AT3G02760 1.0kb upstream 1.0kb upstream 4292 true Chr3: 597359-601650 Arabidopsis thaliana
AT3G02760 1.0kb upstream 1.0kb upstream 1000 false Chr3: 600651-601650 Arabidopsis thaliana
AT3G02760 1.0kb downstream 1.0kb downstream 4292 true Chr3: 596359-600650 Arabidopsis thaliana
AT3G02760 1.0kb downstream 1.0kb downstream 1000 false Chr3: 596359-597358 Arabidopsis thaliana
AT3G02760 2.0kb upstream 2.0kb upstream 5292 true Chr3: 597359-602650 Arabidopsis thaliana
AT3G02760 2.0kb upstream 2.0kb upstream 2000 false Chr3: 600651-602650 Arabidopsis thaliana
AT3G02760 2.0kb downstream 2.0kb downstream 5292 true Chr3: 595359-600650 Arabidopsis thaliana
AT3G02760 2.0kb downstream 2.0kb downstream 2000 false Chr3: 595359-597358 Arabidopsis thaliana
AT3G02760 5.0kb upstream 5.0kb upstream 8292 true Chr3: 597359-605650 Arabidopsis thaliana
AT3G02760 5.0kb upstream 5.0kb upstream 5000 false Chr3: 600651-605650 Arabidopsis thaliana
AT3G02760 5.0kb downstream 5.0kb downstream 8292 true Chr3: 592359-600650 Arabidopsis thaliana
AT3G02760 5.0kb downstream 5.0kb downstream 5000 false Chr3: 592359-597358 Arabidopsis thaliana
AT3G02760 10.0kb upstream 10.0kb upstream 13292 true Chr3: 597359-610650 Arabidopsis thaliana
AT3G02760 10.0kb upstream 10.0kb upstream 10000 false Chr3: 600651-610650 Arabidopsis thaliana
AT3G02760 10.0kb downstream 10.0kb downstream 13292 true Chr3: 587359-600650 Arabidopsis thaliana
AT3G02760 10.0kb downstream 10.0kb downstream 10000 false Chr3: 587359-597358 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364327 5261 Brassicaceae View MSA
123830698 5264 Brassicales-Malvales View MSA
124337694 5266 SBM View MSA
124242303 5268 Malvidae View MSA
124074510 5270 Rosid View MSA
123750553 5271 Pentapetalae View MSA
122793881 5272 Eudicot View MSA
122047537 5273 Angiosperm View MSA
121349127 5274 Embryophyte View MSA
123427860 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.744        
cufflinks 29.329     High  
cufflinks 17.807        
cufflinks 31.537     High  
cufflinks 14.639       Low
cufflinks 33.167     High High

0 Strain