Gene : AT3G02740 A. thaliana TAIR10
Defline:  (1 of 2) PTHR13683//PTHR13683:SF288 - ASPARTYL PROTEASES // ASPARTYL PROTEASE FAMILY PROTEIN-RELATED Genomic Order:  202
Name:  ? AT3G02740 Secondary Identifier:  ? PAC:19658489
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G02740 0.5kb upstream 0.5kb upstream 3239 true Chr3: 589948-593186 Arabidopsis thaliana
AT3G02740 0.5kb upstream 0.5kb upstream 500 false Chr3: 589948-590447 Arabidopsis thaliana
AT3G02740 0.5kb downstream 0.5kb downstream 3239 true Chr3: 590448-593686 Arabidopsis thaliana
AT3G02740 0.5kb downstream 0.5kb downstream 500 false Chr3: 593187-593686 Arabidopsis thaliana
AT3G02740 1.0kb upstream 1.0kb upstream 3739 true Chr3: 589448-593186 Arabidopsis thaliana
AT3G02740 1.0kb upstream 1.0kb upstream 1000 false Chr3: 589448-590447 Arabidopsis thaliana
AT3G02740 1.0kb downstream 1.0kb downstream 3739 true Chr3: 590448-594186 Arabidopsis thaliana
AT3G02740 1.0kb downstream 1.0kb downstream 1000 false Chr3: 593187-594186 Arabidopsis thaliana
AT3G02740 2.0kb upstream 2.0kb upstream 4739 true Chr3: 588448-593186 Arabidopsis thaliana
AT3G02740 2.0kb upstream 2.0kb upstream 2000 false Chr3: 588448-590447 Arabidopsis thaliana
AT3G02740 2.0kb downstream 2.0kb downstream 4739 true Chr3: 590448-595186 Arabidopsis thaliana
AT3G02740 2.0kb downstream 2.0kb downstream 2000 false Chr3: 593187-595186 Arabidopsis thaliana
AT3G02740 5.0kb upstream 5.0kb upstream 7739 true Chr3: 585448-593186 Arabidopsis thaliana
AT3G02740 5.0kb upstream 5.0kb upstream 5000 false Chr3: 585448-590447 Arabidopsis thaliana
AT3G02740 5.0kb downstream 5.0kb downstream 7739 true Chr3: 590448-598186 Arabidopsis thaliana
AT3G02740 5.0kb downstream 5.0kb downstream 5000 false Chr3: 593187-598186 Arabidopsis thaliana
AT3G02740 10.0kb upstream 10.0kb upstream 12739 true Chr3: 580448-593186 Arabidopsis thaliana
AT3G02740 10.0kb upstream 10.0kb upstream 10000 false Chr3: 580448-590447 Arabidopsis thaliana
AT3G02740 10.0kb downstream 10.0kb downstream 12739 true Chr3: 590448-603186 Arabidopsis thaliana
AT3G02740 10.0kb downstream 10.0kb downstream 10000 false Chr3: 593187-603186 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041253 5273 Angiosperm View MSA
122363326 5261 Brassicaceae View MSA
123832868 5264 Brassicales-Malvales View MSA
124348392 5266 SBM View MSA
124244545 5268 Malvidae View MSA
124069940 5270 Rosid View MSA
123745330 5271 Pentapetalae View MSA
122795136 5272 Eudicot View MSA
121309821 5274 Embryophyte View MSA
123347473 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.695        
cufflinks 16.574        
cufflinks 12.338       Low
cufflinks 17.444       High
cufflinks 14.621        
cufflinks 12.498       Low

0 Strain