Gene : AT3G03920 A. thaliana TAIR10
Defline:  (1 of 2) K11128 - H/ACA ribonucleoprotein complex subunit 1 (GAR1, NOLA1) Genomic Order:  333
Name:  ? AT3G03920 Secondary Identifier:  ? PAC:19664572
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G03920 0.5kb upstream 0.5kb upstream 1986 true Chr3: 1008995-1010980 Arabidopsis thaliana
AT3G03920 0.5kb upstream 0.5kb upstream 500 false Chr3: 1010481-1010980 Arabidopsis thaliana
AT3G03920 0.5kb downstream 0.5kb downstream 1986 true Chr3: 1008495-1010480 Arabidopsis thaliana
AT3G03920 0.5kb downstream 0.5kb downstream 500 false Chr3: 1008495-1008994 Arabidopsis thaliana
AT3G03920 1.0kb upstream 1.0kb upstream 2486 true Chr3: 1008995-1011480 Arabidopsis thaliana
AT3G03920 1.0kb upstream 1.0kb upstream 1000 false Chr3: 1010481-1011480 Arabidopsis thaliana
AT3G03920 1.0kb downstream 1.0kb downstream 2486 true Chr3: 1007995-1010480 Arabidopsis thaliana
AT3G03920 1.0kb downstream 1.0kb downstream 1000 false Chr3: 1007995-1008994 Arabidopsis thaliana
AT3G03920 2.0kb upstream 2.0kb upstream 3486 true Chr3: 1008995-1012480 Arabidopsis thaliana
AT3G03920 2.0kb upstream 2.0kb upstream 2000 false Chr3: 1010481-1012480 Arabidopsis thaliana
AT3G03920 2.0kb downstream 2.0kb downstream 3486 true Chr3: 1006995-1010480 Arabidopsis thaliana
AT3G03920 2.0kb downstream 2.0kb downstream 2000 false Chr3: 1006995-1008994 Arabidopsis thaliana
AT3G03920 5.0kb upstream 5.0kb upstream 6486 true Chr3: 1008995-1015480 Arabidopsis thaliana
AT3G03920 5.0kb upstream 5.0kb upstream 5000 false Chr3: 1010481-1015480 Arabidopsis thaliana
AT3G03920 5.0kb downstream 5.0kb downstream 6486 true Chr3: 1003995-1010480 Arabidopsis thaliana
AT3G03920 5.0kb downstream 5.0kb downstream 5000 false Chr3: 1003995-1008994 Arabidopsis thaliana
AT3G03920 10.0kb upstream 10.0kb upstream 11486 true Chr3: 1008995-1020480 Arabidopsis thaliana
AT3G03920 10.0kb upstream 10.0kb upstream 10000 false Chr3: 1010481-1020480 Arabidopsis thaliana
AT3G03920 10.0kb downstream 10.0kb downstream 11486 true Chr3: 998995-1010480 Arabidopsis thaliana
AT3G03920 10.0kb downstream 10.0kb downstream 10000 false Chr3: 998995-1008994 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361416 5261 Brassicaceae View MSA
123837911 5264 Brassicales-Malvales View MSA
124322373 5266 SBM View MSA
124238669 5268 Malvidae View MSA
124060863 5270 Rosid View MSA
123746440 5271 Pentapetalae View MSA
122789002 5272 Eudicot View MSA
122045887 5273 Angiosperm View MSA
121346687 5274 Embryophyte View MSA
123425060 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 40.588     High  
cufflinks 48.743     High  
cufflinks 23.866       Low
cufflinks 54.701     High  
cufflinks 22.647       Low
cufflinks 61.777     High High

0 Strain