Gene : RBR1 A. thaliana TAIR10
Primary Identifier:  ? AT3G12280 Defline:  (1 of 1) K04681 - retinoblastoma-like protein 1 (RBL1)
Genomic Order:  1209 Name:  ? AT3G12280
Secondary Identifier:  ? PAC:19663428
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Expression

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5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G12280 0.5kb upstream 0.5kb upstream 6259 true Chr3: 3913412-3919670 Arabidopsis thaliana
AT3G12280 0.5kb upstream 0.5kb upstream 500 false Chr3: 3919171-3919670 Arabidopsis thaliana
AT3G12280 0.5kb downstream 0.5kb downstream 6259 true Chr3: 3912912-3919170 Arabidopsis thaliana
AT3G12280 0.5kb downstream 0.5kb downstream 500 false Chr3: 3912912-3913411 Arabidopsis thaliana
AT3G12280 1.0kb upstream 1.0kb upstream 6759 true Chr3: 3913412-3920170 Arabidopsis thaliana
AT3G12280 1.0kb upstream 1.0kb upstream 1000 false Chr3: 3919171-3920170 Arabidopsis thaliana
AT3G12280 1.0kb downstream 1.0kb downstream 6759 true Chr3: 3912412-3919170 Arabidopsis thaliana
AT3G12280 1.0kb downstream 1.0kb downstream 1000 false Chr3: 3912412-3913411 Arabidopsis thaliana
AT3G12280 2.0kb upstream 2.0kb upstream 7759 true Chr3: 3913412-3921170 Arabidopsis thaliana
AT3G12280 2.0kb upstream 2.0kb upstream 2000 false Chr3: 3919171-3921170 Arabidopsis thaliana
AT3G12280 2.0kb downstream 2.0kb downstream 7759 true Chr3: 3911412-3919170 Arabidopsis thaliana
AT3G12280 2.0kb downstream 2.0kb downstream 2000 false Chr3: 3911412-3913411 Arabidopsis thaliana
AT3G12280 5.0kb upstream 5.0kb upstream 10759 true Chr3: 3913412-3924170 Arabidopsis thaliana
AT3G12280 5.0kb upstream 5.0kb upstream 5000 false Chr3: 3919171-3924170 Arabidopsis thaliana
AT3G12280 5.0kb downstream 5.0kb downstream 10759 true Chr3: 3908412-3919170 Arabidopsis thaliana
AT3G12280 5.0kb downstream 5.0kb downstream 5000 false Chr3: 3908412-3913411 Arabidopsis thaliana
AT3G12280 10.0kb upstream 10.0kb upstream 15759 true Chr3: 3913412-3929170 Arabidopsis thaliana
AT3G12280 10.0kb upstream 10.0kb upstream 10000 false Chr3: 3919171-3929170 Arabidopsis thaliana
AT3G12280 10.0kb downstream 10.0kb downstream 15759 true Chr3: 3903412-3919170 Arabidopsis thaliana
AT3G12280 10.0kb downstream 10.0kb downstream 10000 false Chr3: 3903412-3913411 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361872 5261 Brassicaceae View MSA
123834316 5264 Brassicales-Malvales View MSA
124337356 5266 SBM View MSA
124244515 5268 Malvidae View MSA
124061822 5270 Rosid View MSA
123736877 5271 Pentapetalae View MSA
122788600 5272 Eudicot View MSA
122042137 5273 Angiosperm View MSA
121347366 5274 Embryophyte View MSA
123428673 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.028        
cufflinks 6.06        
cufflinks 3.257       Low
cufflinks 5.638        
cufflinks 3.493        
cufflinks 6.318       High

0 Strain