Gene : ACLB-1 A. thaliana TAIR10
Primary Identifier:  ? AT3G06650 Defline:  (1 of 2) PTHR23118:SF6 - ATP-CITRATE SYNTHASE BETA CHAIN PROTEIN 1
Genomic Order:  645 Name:  ? AT3G06650
Secondary Identifier:  ? PAC:19663098
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5172 Arabidopsis thaliana pathologic  
Athaliana PWY-5173 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G06650 0.5kb upstream 0.5kb upstream 4759 true Chr3: 2079033-2083791 Arabidopsis thaliana
AT3G06650 0.5kb upstream 0.5kb upstream 500 false Chr3: 2083292-2083791 Arabidopsis thaliana
AT3G06650 0.5kb downstream 0.5kb downstream 4759 true Chr3: 2078533-2083291 Arabidopsis thaliana
AT3G06650 0.5kb downstream 0.5kb downstream 500 false Chr3: 2078533-2079032 Arabidopsis thaliana
AT3G06650 1.0kb upstream 1.0kb upstream 5259 true Chr3: 2079033-2084291 Arabidopsis thaliana
AT3G06650 1.0kb upstream 1.0kb upstream 1000 false Chr3: 2083292-2084291 Arabidopsis thaliana
AT3G06650 1.0kb downstream 1.0kb downstream 5259 true Chr3: 2078033-2083291 Arabidopsis thaliana
AT3G06650 1.0kb downstream 1.0kb downstream 1000 false Chr3: 2078033-2079032 Arabidopsis thaliana
AT3G06650 2.0kb upstream 2.0kb upstream 6259 true Chr3: 2079033-2085291 Arabidopsis thaliana
AT3G06650 2.0kb upstream 2.0kb upstream 2000 false Chr3: 2083292-2085291 Arabidopsis thaliana
AT3G06650 2.0kb downstream 2.0kb downstream 6259 true Chr3: 2077033-2083291 Arabidopsis thaliana
AT3G06650 2.0kb downstream 2.0kb downstream 2000 false Chr3: 2077033-2079032 Arabidopsis thaliana
AT3G06650 5.0kb upstream 5.0kb upstream 9259 true Chr3: 2079033-2088291 Arabidopsis thaliana
AT3G06650 5.0kb upstream 5.0kb upstream 5000 false Chr3: 2083292-2088291 Arabidopsis thaliana
AT3G06650 5.0kb downstream 5.0kb downstream 9259 true Chr3: 2074033-2083291 Arabidopsis thaliana
AT3G06650 5.0kb downstream 5.0kb downstream 5000 false Chr3: 2074033-2079032 Arabidopsis thaliana
AT3G06650 10.0kb upstream 10.0kb upstream 14259 true Chr3: 2079033-2093291 Arabidopsis thaliana
AT3G06650 10.0kb upstream 10.0kb upstream 10000 false Chr3: 2083292-2093291 Arabidopsis thaliana
AT3G06650 10.0kb downstream 10.0kb downstream 14259 true Chr3: 2069033-2083291 Arabidopsis thaliana
AT3G06650 10.0kb downstream 10.0kb downstream 10000 false Chr3: 2069033-2079032 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376807 5261 Brassicaceae View MSA
123838155 5264 Brassicales-Malvales View MSA
124340506 5266 SBM View MSA
124250755 5268 Malvidae View MSA
124062088 5270 Rosid View MSA
123736971 5271 Pentapetalae View MSA
122787632 5272 Eudicot View MSA
122045238 5273 Angiosperm View MSA
121345896 5274 Embryophyte View MSA
123427786 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.239        
cufflinks 20.525       Low
cufflinks 28.852     High  
cufflinks 27.812        
cufflinks 24.627        
cufflinks 29.656     High  

0 Strain