Gene : GMD1 A. thaliana TAIR10
Primary Identifier:  ? AT5G66280 Defline:  (1 of 2) 4.2.1.47 - GDP-mannose 4,6-dehydratase / Guanosine diphosphomannose oxidoreductase
Genomic Order:  6171 Name:  ? AT5G66280
Secondary Identifier:  ? PAC:19672517
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-66 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G66280 0.5kb upstream 0.5kb upstream 2089 true Chr5: 26475666-26477754 Arabidopsis thaliana
AT5G66280 0.5kb upstream 0.5kb upstream 500 false Chr5: 26475666-26476165 Arabidopsis thaliana
AT5G66280 0.5kb downstream 0.5kb downstream 2089 true Chr5: 26476166-26478254 Arabidopsis thaliana
AT5G66280 0.5kb downstream 0.5kb downstream 500 false Chr5: 26477755-26478254 Arabidopsis thaliana
AT5G66280 1.0kb upstream 1.0kb upstream 2589 true Chr5: 26475166-26477754 Arabidopsis thaliana
AT5G66280 1.0kb upstream 1.0kb upstream 1000 false Chr5: 26475166-26476165 Arabidopsis thaliana
AT5G66280 1.0kb downstream 1.0kb downstream 2589 true Chr5: 26476166-26478754 Arabidopsis thaliana
AT5G66280 1.0kb downstream 1.0kb downstream 1000 false Chr5: 26477755-26478754 Arabidopsis thaliana
AT5G66280 2.0kb upstream 2.0kb upstream 3589 true Chr5: 26474166-26477754 Arabidopsis thaliana
AT5G66280 2.0kb upstream 2.0kb upstream 2000 false Chr5: 26474166-26476165 Arabidopsis thaliana
AT5G66280 2.0kb downstream 2.0kb downstream 3589 true Chr5: 26476166-26479754 Arabidopsis thaliana
AT5G66280 2.0kb downstream 2.0kb downstream 2000 false Chr5: 26477755-26479754 Arabidopsis thaliana
AT5G66280 5.0kb upstream 5.0kb upstream 6589 true Chr5: 26471166-26477754 Arabidopsis thaliana
AT5G66280 5.0kb upstream 5.0kb upstream 5000 false Chr5: 26471166-26476165 Arabidopsis thaliana
AT5G66280 5.0kb downstream 5.0kb downstream 6589 true Chr5: 26476166-26482754 Arabidopsis thaliana
AT5G66280 5.0kb downstream 5.0kb downstream 5000 false Chr5: 26477755-26482754 Arabidopsis thaliana
AT5G66280 10.0kb upstream 10.0kb upstream 11589 true Chr5: 26466166-26477754 Arabidopsis thaliana
AT5G66280 10.0kb upstream 10.0kb upstream 10000 false Chr5: 26466166-26476165 Arabidopsis thaliana
AT5G66280 10.0kb downstream 10.0kb downstream 11589 true Chr5: 26476166-26487754 Arabidopsis thaliana
AT5G66280 10.0kb downstream 10.0kb downstream 10000 false Chr5: 26477755-26487754 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367788 5261 Brassicaceae View MSA
123837029 5264 Brassicales-Malvales View MSA
124339356 5266 SBM View MSA
124242561 5268 Malvidae View MSA
124064315 5270 Rosid View MSA
123741252 5271 Pentapetalae View MSA
122791401 5272 Eudicot View MSA
122046921 5273 Angiosperm View MSA
121346448 5274 Embryophyte View MSA
123424854 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.254     Low  
cufflinks 5.529        
cufflinks 0.048     Low Low
cufflinks 9.317        
cufflinks 0.152     Low  
cufflinks 12.865       High

0 Strain