Gene : AT5G62710 A. thaliana TAIR10
Defline:  (1 of 13) PF00069//PF08263 - Protein kinase domain (Pkinase) // Leucine rich repeat N-terminal domain (LRRNT_2) Genomic Order:  5780
Name:  ? AT5G62710 Secondary Identifier:  ? PAC:19670643
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G62710 0.5kb upstream 0.5kb upstream 3798 true Chr5: 25186803-25190600 Arabidopsis thaliana
AT5G62710 0.5kb upstream 0.5kb upstream 500 false Chr5: 25186803-25187302 Arabidopsis thaliana
AT5G62710 0.5kb downstream 0.5kb downstream 3798 true Chr5: 25187303-25191100 Arabidopsis thaliana
AT5G62710 0.5kb downstream 0.5kb downstream 500 false Chr5: 25190601-25191100 Arabidopsis thaliana
AT5G62710 1.0kb upstream 1.0kb upstream 4298 true Chr5: 25186303-25190600 Arabidopsis thaliana
AT5G62710 1.0kb upstream 1.0kb upstream 1000 false Chr5: 25186303-25187302 Arabidopsis thaliana
AT5G62710 1.0kb downstream 1.0kb downstream 4298 true Chr5: 25187303-25191600 Arabidopsis thaliana
AT5G62710 1.0kb downstream 1.0kb downstream 1000 false Chr5: 25190601-25191600 Arabidopsis thaliana
AT5G62710 2.0kb upstream 2.0kb upstream 5298 true Chr5: 25185303-25190600 Arabidopsis thaliana
AT5G62710 2.0kb upstream 2.0kb upstream 2000 false Chr5: 25185303-25187302 Arabidopsis thaliana
AT5G62710 2.0kb downstream 2.0kb downstream 5298 true Chr5: 25187303-25192600 Arabidopsis thaliana
AT5G62710 2.0kb downstream 2.0kb downstream 2000 false Chr5: 25190601-25192600 Arabidopsis thaliana
AT5G62710 5.0kb upstream 5.0kb upstream 8298 true Chr5: 25182303-25190600 Arabidopsis thaliana
AT5G62710 5.0kb upstream 5.0kb upstream 5000 false Chr5: 25182303-25187302 Arabidopsis thaliana
AT5G62710 5.0kb downstream 5.0kb downstream 8298 true Chr5: 25187303-25195600 Arabidopsis thaliana
AT5G62710 5.0kb downstream 5.0kb downstream 5000 false Chr5: 25190601-25195600 Arabidopsis thaliana
AT5G62710 10.0kb upstream 10.0kb upstream 13298 true Chr5: 25177303-25190600 Arabidopsis thaliana
AT5G62710 10.0kb upstream 10.0kb upstream 10000 false Chr5: 25177303-25187302 Arabidopsis thaliana
AT5G62710 10.0kb downstream 10.0kb downstream 13298 true Chr5: 25187303-25200600 Arabidopsis thaliana
AT5G62710 10.0kb downstream 10.0kb downstream 10000 false Chr5: 25190601-25200600 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366694 5261 Brassicaceae View MSA
123841456 5264 Brassicales-Malvales View MSA
124340938 5266 SBM View MSA
124250611 5268 Malvidae View MSA
124061157 5270 Rosid View MSA
123736912 5271 Pentapetalae View MSA
122790895 5272 Eudicot View MSA
122046915 5273 Angiosperm View MSA
121348234 5274 Embryophyte View MSA
123380786 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.615        
cufflinks 16.688        
cufflinks 1.836        
cufflinks 15.427        
cufflinks 1.429       Low
cufflinks 22.249       High

0 Strain