Gene : AT5G58330 A. thaliana TAIR10
Defline:  (1 of 1) K00051 - malate dehydrogenase (NADP+) (E1.1.1.82) Genomic Order:  5322
Name:  ? AT5G58330 Secondary Identifier:  ? PAC:19669099
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana GLUCONEO-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-241 Arabidopsis thaliana pathologic  
Athaliana PWY-7117 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G58330 0.5kb upstream 0.5kb upstream 3174 true Chr5: 23579722-23582895 Arabidopsis thaliana
AT5G58330 0.5kb upstream 0.5kb upstream 500 false Chr5: 23582396-23582895 Arabidopsis thaliana
AT5G58330 0.5kb downstream 0.5kb downstream 3174 true Chr5: 23579222-23582395 Arabidopsis thaliana
AT5G58330 0.5kb downstream 0.5kb downstream 500 false Chr5: 23579222-23579721 Arabidopsis thaliana
AT5G58330 1.0kb upstream 1.0kb upstream 3674 true Chr5: 23579722-23583395 Arabidopsis thaliana
AT5G58330 1.0kb upstream 1.0kb upstream 1000 false Chr5: 23582396-23583395 Arabidopsis thaliana
AT5G58330 1.0kb downstream 1.0kb downstream 3674 true Chr5: 23578722-23582395 Arabidopsis thaliana
AT5G58330 1.0kb downstream 1.0kb downstream 1000 false Chr5: 23578722-23579721 Arabidopsis thaliana
AT5G58330 2.0kb upstream 2.0kb upstream 4674 true Chr5: 23579722-23584395 Arabidopsis thaliana
AT5G58330 2.0kb upstream 2.0kb upstream 2000 false Chr5: 23582396-23584395 Arabidopsis thaliana
AT5G58330 2.0kb downstream 2.0kb downstream 4674 true Chr5: 23577722-23582395 Arabidopsis thaliana
AT5G58330 2.0kb downstream 2.0kb downstream 2000 false Chr5: 23577722-23579721 Arabidopsis thaliana
AT5G58330 5.0kb upstream 5.0kb upstream 7674 true Chr5: 23579722-23587395 Arabidopsis thaliana
AT5G58330 5.0kb upstream 5.0kb upstream 5000 false Chr5: 23582396-23587395 Arabidopsis thaliana
AT5G58330 5.0kb downstream 5.0kb downstream 7674 true Chr5: 23574722-23582395 Arabidopsis thaliana
AT5G58330 5.0kb downstream 5.0kb downstream 5000 false Chr5: 23574722-23579721 Arabidopsis thaliana
AT5G58330 10.0kb upstream 10.0kb upstream 12674 true Chr5: 23579722-23592395 Arabidopsis thaliana
AT5G58330 10.0kb upstream 10.0kb upstream 10000 false Chr5: 23582396-23592395 Arabidopsis thaliana
AT5G58330 10.0kb downstream 10.0kb downstream 12674 true Chr5: 23569722-23582395 Arabidopsis thaliana
AT5G58330 10.0kb downstream 10.0kb downstream 10000 false Chr5: 23569722-23579721 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373591 5261 Brassicaceae View MSA
123834055 5264 Brassicales-Malvales View MSA
124344297 5266 SBM View MSA
124238897 5268 Malvidae View MSA
124061971 5270 Rosid View MSA
123738843 5271 Pentapetalae View MSA
122785596 5272 Eudicot View MSA
122041880 5273 Angiosperm View MSA
121345837 5274 Embryophyte View MSA
123423785 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 45.446     High  
cufflinks 0.55        
cufflinks 49.06     High  
cufflinks 1.022        
cufflinks 48.426     High  
cufflinks 0.198     Low Low

0 Strain