Gene : ACT4 A. thaliana TAIR10
Primary Identifier:  ? AT5G59370 Defline:  (1 of 3) PTHR11937//PTHR11937:SF255 - ACTIN // SUBFAMILY NOT NAMED
Genomic Order:  5433 Name:  ? AT5G59370
Secondary Identifier:  ? PAC:19668814
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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G59370 0.5kb upstream 0.5kb upstream 2599 true Chr5: 23949239-23951837 Arabidopsis thaliana
AT5G59370 0.5kb upstream 0.5kb upstream 500 false Chr5: 23949239-23949738 Arabidopsis thaliana
AT5G59370 0.5kb downstream 0.5kb downstream 2599 true Chr5: 23949739-23952337 Arabidopsis thaliana
AT5G59370 0.5kb downstream 0.5kb downstream 500 false Chr5: 23951838-23952337 Arabidopsis thaliana
AT5G59370 1.0kb upstream 1.0kb upstream 3099 true Chr5: 23948739-23951837 Arabidopsis thaliana
AT5G59370 1.0kb upstream 1.0kb upstream 1000 false Chr5: 23948739-23949738 Arabidopsis thaliana
AT5G59370 1.0kb downstream 1.0kb downstream 3099 true Chr5: 23949739-23952837 Arabidopsis thaliana
AT5G59370 1.0kb downstream 1.0kb downstream 1000 false Chr5: 23951838-23952837 Arabidopsis thaliana
AT5G59370 2.0kb upstream 2.0kb upstream 4099 true Chr5: 23947739-23951837 Arabidopsis thaliana
AT5G59370 2.0kb upstream 2.0kb upstream 2000 false Chr5: 23947739-23949738 Arabidopsis thaliana
AT5G59370 2.0kb downstream 2.0kb downstream 4099 true Chr5: 23949739-23953837 Arabidopsis thaliana
AT5G59370 2.0kb downstream 2.0kb downstream 2000 false Chr5: 23951838-23953837 Arabidopsis thaliana
AT5G59370 5.0kb upstream 5.0kb upstream 7099 true Chr5: 23944739-23951837 Arabidopsis thaliana
AT5G59370 5.0kb upstream 5.0kb upstream 5000 false Chr5: 23944739-23949738 Arabidopsis thaliana
AT5G59370 5.0kb downstream 5.0kb downstream 7099 true Chr5: 23949739-23956837 Arabidopsis thaliana
AT5G59370 5.0kb downstream 5.0kb downstream 5000 false Chr5: 23951838-23956837 Arabidopsis thaliana
AT5G59370 10.0kb upstream 10.0kb upstream 12099 true Chr5: 23939739-23951837 Arabidopsis thaliana
AT5G59370 10.0kb upstream 10.0kb upstream 10000 false Chr5: 23939739-23949738 Arabidopsis thaliana
AT5G59370 10.0kb downstream 10.0kb downstream 12099 true Chr5: 23949739-23961837 Arabidopsis thaliana
AT5G59370 10.0kb downstream 10.0kb downstream 10000 false Chr5: 23951838-23961837 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122331156 5261 Brassicaceae Singleton cluster - no MSA
123772359 5264 Brassicales-Malvales Singleton cluster - no MSA
124270876 5266 SBM Singleton cluster - no MSA
124247966 5268 Malvidae View MSA
124041667 5270 Rosid View MSA
123752253 5271 Pentapetalae View MSA
122794505 5272 Eudicot View MSA
122049993 5273 Angiosperm View MSA
123429016 5275 Viridiplantae View MSA
121350794 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.013     Low Low
cufflinks 0.119     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.204     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.232     Low  

0 Strain