Gene : BXL1 A. thaliana TAIR10
Primary Identifier:  ? AT5G49360 Defline:  (1 of 1) PTHR30620//PTHR30620:SF50 - PERIPLASMIC BETA-GLUCOSIDASE-RELATED // BETA-D-XYLOSIDASE 1
Genomic Order:  4347 Name:  ? AT5G49360
Secondary Identifier:  ? PAC:19672482
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G49360 0.5kb upstream 0.5kb upstream 5364 true Chr5: 20011879-20017242 Arabidopsis thaliana
AT5G49360 0.5kb upstream 0.5kb upstream 500 false Chr5: 20016743-20017242 Arabidopsis thaliana
AT5G49360 0.5kb downstream 0.5kb downstream 5364 true Chr5: 20011379-20016742 Arabidopsis thaliana
AT5G49360 0.5kb downstream 0.5kb downstream 500 false Chr5: 20011379-20011878 Arabidopsis thaliana
AT5G49360 1.0kb upstream 1.0kb upstream 5864 true Chr5: 20011879-20017742 Arabidopsis thaliana
AT5G49360 1.0kb upstream 1.0kb upstream 1000 false Chr5: 20016743-20017742 Arabidopsis thaliana
AT5G49360 1.0kb downstream 1.0kb downstream 5864 true Chr5: 20010879-20016742 Arabidopsis thaliana
AT5G49360 1.0kb downstream 1.0kb downstream 1000 false Chr5: 20010879-20011878 Arabidopsis thaliana
AT5G49360 2.0kb upstream 2.0kb upstream 6864 true Chr5: 20011879-20018742 Arabidopsis thaliana
AT5G49360 2.0kb upstream 2.0kb upstream 2000 false Chr5: 20016743-20018742 Arabidopsis thaliana
AT5G49360 2.0kb downstream 2.0kb downstream 6864 true Chr5: 20009879-20016742 Arabidopsis thaliana
AT5G49360 2.0kb downstream 2.0kb downstream 2000 false Chr5: 20009879-20011878 Arabidopsis thaliana
AT5G49360 5.0kb upstream 5.0kb upstream 9864 true Chr5: 20011879-20021742 Arabidopsis thaliana
AT5G49360 5.0kb upstream 5.0kb upstream 5000 false Chr5: 20016743-20021742 Arabidopsis thaliana
AT5G49360 5.0kb downstream 5.0kb downstream 9864 true Chr5: 20006879-20016742 Arabidopsis thaliana
AT5G49360 5.0kb downstream 5.0kb downstream 5000 false Chr5: 20006879-20011878 Arabidopsis thaliana
AT5G49360 10.0kb upstream 10.0kb upstream 14864 true Chr5: 20011879-20026742 Arabidopsis thaliana
AT5G49360 10.0kb upstream 10.0kb upstream 10000 false Chr5: 20016743-20026742 Arabidopsis thaliana
AT5G49360 10.0kb downstream 10.0kb downstream 14864 true Chr5: 20001879-20016742 Arabidopsis thaliana
AT5G49360 10.0kb downstream 10.0kb downstream 10000 false Chr5: 20001879-20011878 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371327 5261 Brassicaceae View MSA
123828897 5264 Brassicales-Malvales View MSA
124341988 5266 SBM View MSA
124250711 5268 Malvidae View MSA
124066127 5270 Rosid View MSA
123744774 5271 Pentapetalae View MSA
122789153 5272 Eudicot View MSA
122047485 5273 Angiosperm View MSA
121349595 5274 Embryophyte View MSA
123381370 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.215     High  
cufflinks 2.688       Low
cufflinks 33.912     High  
cufflinks 7.41        
cufflinks 53.944     High High
cufflinks 2.685       Low

0 Strain