Gene : AT5G46150 A. thaliana TAIR10
Defline:  (1 of 1) PTHR10926//PTHR10926:SF29 - CELL CYCLE CONTROL PROTEIN 50 // ALA-INTERACTING SUBUNIT 2-RELATED Genomic Order:  3996
Name:  ? AT5G46150 Secondary Identifier:  ? PAC:19668934
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G46150 0.5kb upstream 0.5kb upstream 3448 true Chr5: 18707646-18711093 Arabidopsis thaliana
AT5G46150 0.5kb upstream 0.5kb upstream 500 false Chr5: 18710594-18711093 Arabidopsis thaliana
AT5G46150 0.5kb downstream 0.5kb downstream 3448 true Chr5: 18707146-18710593 Arabidopsis thaliana
AT5G46150 0.5kb downstream 0.5kb downstream 500 false Chr5: 18707146-18707645 Arabidopsis thaliana
AT5G46150 1.0kb upstream 1.0kb upstream 3948 true Chr5: 18707646-18711593 Arabidopsis thaliana
AT5G46150 1.0kb upstream 1.0kb upstream 1000 false Chr5: 18710594-18711593 Arabidopsis thaliana
AT5G46150 1.0kb downstream 1.0kb downstream 3948 true Chr5: 18706646-18710593 Arabidopsis thaliana
AT5G46150 1.0kb downstream 1.0kb downstream 1000 false Chr5: 18706646-18707645 Arabidopsis thaliana
AT5G46150 2.0kb upstream 2.0kb upstream 4948 true Chr5: 18707646-18712593 Arabidopsis thaliana
AT5G46150 2.0kb upstream 2.0kb upstream 2000 false Chr5: 18710594-18712593 Arabidopsis thaliana
AT5G46150 2.0kb downstream 2.0kb downstream 4948 true Chr5: 18705646-18710593 Arabidopsis thaliana
AT5G46150 2.0kb downstream 2.0kb downstream 2000 false Chr5: 18705646-18707645 Arabidopsis thaliana
AT5G46150 5.0kb upstream 5.0kb upstream 7948 true Chr5: 18707646-18715593 Arabidopsis thaliana
AT5G46150 5.0kb upstream 5.0kb upstream 5000 false Chr5: 18710594-18715593 Arabidopsis thaliana
AT5G46150 5.0kb downstream 5.0kb downstream 7948 true Chr5: 18702646-18710593 Arabidopsis thaliana
AT5G46150 5.0kb downstream 5.0kb downstream 5000 false Chr5: 18702646-18707645 Arabidopsis thaliana
AT5G46150 10.0kb upstream 10.0kb upstream 12948 true Chr5: 18707646-18720593 Arabidopsis thaliana
AT5G46150 10.0kb upstream 10.0kb upstream 10000 false Chr5: 18710594-18720593 Arabidopsis thaliana
AT5G46150 10.0kb downstream 10.0kb downstream 12948 true Chr5: 18697646-18710593 Arabidopsis thaliana
AT5G46150 10.0kb downstream 10.0kb downstream 10000 false Chr5: 18697646-18707645 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368514 5261 Brassicaceae View MSA
123836215 5264 Brassicales-Malvales View MSA
124339205 5266 SBM View MSA
124243331 5268 Malvidae View MSA
124063824 5270 Rosid View MSA
123737417 5271 Pentapetalae View MSA
122786887 5272 Eudicot View MSA
122046235 5273 Angiosperm View MSA
121349346 5274 Embryophyte View MSA
123425782 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.007        
cufflinks 11.521       High
cufflinks 5.404       Low
cufflinks 11.34       High
cufflinks 6.122        
cufflinks 8.7        

0 Strain