Gene : HOT5 A. thaliana TAIR10
Primary Identifier:  ? AT5G43940 Defline:  (1 of 1) 1.1.1.1//1.1.1.284//1.2.1.1 - Alcohol dehydrogenase / Aldehyde reductase // S-(hydroxymethyl)glutathione dehydrogenase / NAD-linked formaldehyde dehydrogenase // Transferred entry: 1.1.1.284 and 4.4.1.22
Genomic Order:  3748 Name:  ? AT5G43940
Secondary Identifier:  ? PAC:19669621
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7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-1801 Arabidopsis thaliana pathologic  
Athaliana PWY-5486 Arabidopsis thaliana pathologic  
Athaliana PWY-5751 Arabidopsis thaliana pathologic  
Athaliana PWY-6333 Arabidopsis thaliana pathologic  
Athaliana PWY66-21 Arabidopsis thaliana pathologic  
Athaliana PWY66-389 Arabidopsis thaliana pathologic  
Athaliana PWY-6802 Arabidopsis thaliana pathologic  

Genomics

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Expression

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5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G43940 0.5kb upstream 0.5kb upstream 2879 true Chr5: 17683656-17686534 Arabidopsis thaliana
AT5G43940 0.5kb upstream 0.5kb upstream 500 false Chr5: 17683656-17684155 Arabidopsis thaliana
AT5G43940 0.5kb downstream 0.5kb downstream 2879 true Chr5: 17684156-17687034 Arabidopsis thaliana
AT5G43940 0.5kb downstream 0.5kb downstream 500 false Chr5: 17686535-17687034 Arabidopsis thaliana
AT5G43940 1.0kb upstream 1.0kb upstream 3379 true Chr5: 17683156-17686534 Arabidopsis thaliana
AT5G43940 1.0kb upstream 1.0kb upstream 1000 false Chr5: 17683156-17684155 Arabidopsis thaliana
AT5G43940 1.0kb downstream 1.0kb downstream 3379 true Chr5: 17684156-17687534 Arabidopsis thaliana
AT5G43940 1.0kb downstream 1.0kb downstream 1000 false Chr5: 17686535-17687534 Arabidopsis thaliana
AT5G43940 2.0kb upstream 2.0kb upstream 4379 true Chr5: 17682156-17686534 Arabidopsis thaliana
AT5G43940 2.0kb upstream 2.0kb upstream 2000 false Chr5: 17682156-17684155 Arabidopsis thaliana
AT5G43940 2.0kb downstream 2.0kb downstream 4379 true Chr5: 17684156-17688534 Arabidopsis thaliana
AT5G43940 2.0kb downstream 2.0kb downstream 2000 false Chr5: 17686535-17688534 Arabidopsis thaliana
AT5G43940 5.0kb upstream 5.0kb upstream 7379 true Chr5: 17679156-17686534 Arabidopsis thaliana
AT5G43940 5.0kb upstream 5.0kb upstream 5000 false Chr5: 17679156-17684155 Arabidopsis thaliana
AT5G43940 5.0kb downstream 5.0kb downstream 7379 true Chr5: 17684156-17691534 Arabidopsis thaliana
AT5G43940 5.0kb downstream 5.0kb downstream 5000 false Chr5: 17686535-17691534 Arabidopsis thaliana
AT5G43940 10.0kb upstream 10.0kb upstream 12379 true Chr5: 17674156-17686534 Arabidopsis thaliana
AT5G43940 10.0kb upstream 10.0kb upstream 10000 false Chr5: 17674156-17684155 Arabidopsis thaliana
AT5G43940 10.0kb downstream 10.0kb downstream 12379 true Chr5: 17684156-17696534 Arabidopsis thaliana
AT5G43940 10.0kb downstream 10.0kb downstream 10000 false Chr5: 17686535-17696534 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367475 5261 Brassicaceae View MSA
123831887 5264 Brassicales-Malvales View MSA
124337937 5266 SBM View MSA
124251337 5268 Malvidae View MSA
124074048 5270 Rosid View MSA
123750363 5271 Pentapetalae View MSA
122796866 5272 Eudicot View MSA
122050713 5273 Angiosperm View MSA
121350624 5274 Embryophyte View MSA
123428625 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 72.302     High  
cufflinks 66.501     High  
cufflinks 73.93     High High
cufflinks 61.747     High Low
cufflinks 72.168     High  
cufflinks 61.306     High Low

0 Strain