Gene : CAC2 A. thaliana TAIR10
Primary Identifier:  ? AT5G35360 Defline:  (1 of 1) K01961 - acetyl-CoA carboxylase, biotin carboxylase subunit (accC)
Genomic Order:  2842 Name:  ? AT5G35360
Secondary Identifier:  ? PAC:19671567
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY0-1264 Arabidopsis thaliana pathologic  
Athaliana PWY-4381 Arabidopsis thaliana pathologic  
Athaliana PWY-5156 Arabidopsis thaliana pathologic  
Athaliana PWY-7388 Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G35360 0.5kb upstream 0.5kb upstream 4891 true Chr5: 13583606-13588496 Arabidopsis thaliana
AT5G35360 0.5kb upstream 0.5kb upstream 500 false Chr5: 13583606-13584105 Arabidopsis thaliana
AT5G35360 0.5kb downstream 0.5kb downstream 4891 true Chr5: 13584106-13588996 Arabidopsis thaliana
AT5G35360 0.5kb downstream 0.5kb downstream 500 false Chr5: 13588497-13588996 Arabidopsis thaliana
AT5G35360 1.0kb upstream 1.0kb upstream 5391 true Chr5: 13583106-13588496 Arabidopsis thaliana
AT5G35360 1.0kb upstream 1.0kb upstream 1000 false Chr5: 13583106-13584105 Arabidopsis thaliana
AT5G35360 1.0kb downstream 1.0kb downstream 5391 true Chr5: 13584106-13589496 Arabidopsis thaliana
AT5G35360 1.0kb downstream 1.0kb downstream 1000 false Chr5: 13588497-13589496 Arabidopsis thaliana
AT5G35360 2.0kb upstream 2.0kb upstream 6391 true Chr5: 13582106-13588496 Arabidopsis thaliana
AT5G35360 2.0kb upstream 2.0kb upstream 2000 false Chr5: 13582106-13584105 Arabidopsis thaliana
AT5G35360 2.0kb downstream 2.0kb downstream 6391 true Chr5: 13584106-13590496 Arabidopsis thaliana
AT5G35360 2.0kb downstream 2.0kb downstream 2000 false Chr5: 13588497-13590496 Arabidopsis thaliana
AT5G35360 5.0kb upstream 5.0kb upstream 9391 true Chr5: 13579106-13588496 Arabidopsis thaliana
AT5G35360 5.0kb upstream 5.0kb upstream 5000 false Chr5: 13579106-13584105 Arabidopsis thaliana
AT5G35360 5.0kb downstream 5.0kb downstream 9391 true Chr5: 13584106-13593496 Arabidopsis thaliana
AT5G35360 5.0kb downstream 5.0kb downstream 5000 false Chr5: 13588497-13593496 Arabidopsis thaliana
AT5G35360 10.0kb upstream 10.0kb upstream 14391 true Chr5: 13574106-13588496 Arabidopsis thaliana
AT5G35360 10.0kb upstream 10.0kb upstream 10000 false Chr5: 13574106-13584105 Arabidopsis thaliana
AT5G35360 10.0kb downstream 10.0kb downstream 14391 true Chr5: 13584106-13598496 Arabidopsis thaliana
AT5G35360 10.0kb downstream 10.0kb downstream 10000 false Chr5: 13588497-13598496 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378988 5261 Brassicaceae View MSA
123837075 5264 Brassicales-Malvales View MSA
124347013 5266 SBM View MSA
124253472 5268 Malvidae View MSA
124069238 5270 Rosid View MSA
123745684 5271 Pentapetalae View MSA
122794668 5272 Eudicot View MSA
122048347 5273 Angiosperm View MSA
121348356 5274 Embryophyte View MSA
123425779 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.417        
cufflinks 11.039       Low
cufflinks 20.026       High
cufflinks 12.933        
cufflinks 14.759        
cufflinks 15.467        

0 Strain