Gene : PDR2 A. thaliana TAIR10
Primary Identifier:  ? AT5G23630 Defline:  (1 of 1) K14950 - cation-transporting ATPase 13A1 (ATP13A1)
Genomic Order:  2240 Name:  ? AT5G23630
Secondary Identifier:  ? PAC:19671640
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G23630 0.5kb upstream 0.5kb upstream 7969 true Chr5: 7960478-7968446 Arabidopsis thaliana
AT5G23630 0.5kb upstream 0.5kb upstream 500 false Chr5: 7967947-7968446 Arabidopsis thaliana
AT5G23630 0.5kb downstream 0.5kb downstream 7969 true Chr5: 7959978-7967946 Arabidopsis thaliana
AT5G23630 0.5kb downstream 0.5kb downstream 500 false Chr5: 7959978-7960477 Arabidopsis thaliana
AT5G23630 1.0kb upstream 1.0kb upstream 8469 true Chr5: 7960478-7968946 Arabidopsis thaliana
AT5G23630 1.0kb upstream 1.0kb upstream 1000 false Chr5: 7967947-7968946 Arabidopsis thaliana
AT5G23630 1.0kb downstream 1.0kb downstream 8469 true Chr5: 7959478-7967946 Arabidopsis thaliana
AT5G23630 1.0kb downstream 1.0kb downstream 1000 false Chr5: 7959478-7960477 Arabidopsis thaliana
AT5G23630 2.0kb upstream 2.0kb upstream 9469 true Chr5: 7960478-7969946 Arabidopsis thaliana
AT5G23630 2.0kb upstream 2.0kb upstream 2000 false Chr5: 7967947-7969946 Arabidopsis thaliana
AT5G23630 2.0kb downstream 2.0kb downstream 9469 true Chr5: 7958478-7967946 Arabidopsis thaliana
AT5G23630 2.0kb downstream 2.0kb downstream 2000 false Chr5: 7958478-7960477 Arabidopsis thaliana
AT5G23630 5.0kb upstream 5.0kb upstream 12469 true Chr5: 7960478-7972946 Arabidopsis thaliana
AT5G23630 5.0kb upstream 5.0kb upstream 5000 false Chr5: 7967947-7972946 Arabidopsis thaliana
AT5G23630 5.0kb downstream 5.0kb downstream 12469 true Chr5: 7955478-7967946 Arabidopsis thaliana
AT5G23630 5.0kb downstream 5.0kb downstream 5000 false Chr5: 7955478-7960477 Arabidopsis thaliana
AT5G23630 10.0kb upstream 10.0kb upstream 17469 true Chr5: 7960478-7977946 Arabidopsis thaliana
AT5G23630 10.0kb upstream 10.0kb upstream 10000 false Chr5: 7967947-7977946 Arabidopsis thaliana
AT5G23630 10.0kb downstream 10.0kb downstream 17469 true Chr5: 7950478-7967946 Arabidopsis thaliana
AT5G23630 10.0kb downstream 10.0kb downstream 10000 false Chr5: 7950478-7960477 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026494 5273 Angiosperm View MSA
122362774 5261 Brassicaceae View MSA
123830865 5264 Brassicales-Malvales View MSA
124344881 5266 SBM View MSA
124250133 5268 Malvidae View MSA
124068508 5270 Rosid View MSA
123739596 5271 Pentapetalae View MSA
122790607 5272 Eudicot View MSA
121344570 5274 Embryophyte View MSA
123424459 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.614        
cufflinks 13.549        
cufflinks 7.925       Low
cufflinks 15.944       High
cufflinks 8.679        
cufflinks 15.747       High

0 Strain