Gene : RHF2A A. thaliana TAIR10
Primary Identifier:  ? AT5G22000 Defline:  (1 of 1) PTHR22763//PTHR22763:SF47 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED
Genomic Order:  2068 Name:  ? AT5G22000
Secondary Identifier:  ? PAC:19665848
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G22000 0.5kb upstream 0.5kb upstream 3573 true Chr5: 7276683-7280255 Arabidopsis thaliana
AT5G22000 0.5kb upstream 0.5kb upstream 500 false Chr5: 7276683-7277182 Arabidopsis thaliana
AT5G22000 0.5kb downstream 0.5kb downstream 3573 true Chr5: 7277183-7280755 Arabidopsis thaliana
AT5G22000 0.5kb downstream 0.5kb downstream 500 false Chr5: 7280256-7280755 Arabidopsis thaliana
AT5G22000 1.0kb upstream 1.0kb upstream 4073 true Chr5: 7276183-7280255 Arabidopsis thaliana
AT5G22000 1.0kb upstream 1.0kb upstream 1000 false Chr5: 7276183-7277182 Arabidopsis thaliana
AT5G22000 1.0kb downstream 1.0kb downstream 4073 true Chr5: 7277183-7281255 Arabidopsis thaliana
AT5G22000 1.0kb downstream 1.0kb downstream 1000 false Chr5: 7280256-7281255 Arabidopsis thaliana
AT5G22000 2.0kb upstream 2.0kb upstream 5073 true Chr5: 7275183-7280255 Arabidopsis thaliana
AT5G22000 2.0kb upstream 2.0kb upstream 2000 false Chr5: 7275183-7277182 Arabidopsis thaliana
AT5G22000 2.0kb downstream 2.0kb downstream 5073 true Chr5: 7277183-7282255 Arabidopsis thaliana
AT5G22000 2.0kb downstream 2.0kb downstream 2000 false Chr5: 7280256-7282255 Arabidopsis thaliana
AT5G22000 5.0kb upstream 5.0kb upstream 8073 true Chr5: 7272183-7280255 Arabidopsis thaliana
AT5G22000 5.0kb upstream 5.0kb upstream 5000 false Chr5: 7272183-7277182 Arabidopsis thaliana
AT5G22000 5.0kb downstream 5.0kb downstream 8073 true Chr5: 7277183-7285255 Arabidopsis thaliana
AT5G22000 5.0kb downstream 5.0kb downstream 5000 false Chr5: 7280256-7285255 Arabidopsis thaliana
AT5G22000 10.0kb upstream 10.0kb upstream 13073 true Chr5: 7267183-7280255 Arabidopsis thaliana
AT5G22000 10.0kb upstream 10.0kb upstream 10000 false Chr5: 7267183-7277182 Arabidopsis thaliana
AT5G22000 10.0kb downstream 10.0kb downstream 13073 true Chr5: 7277183-7290255 Arabidopsis thaliana
AT5G22000 10.0kb downstream 10.0kb downstream 10000 false Chr5: 7280256-7290255 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377079 5261 Brassicaceae View MSA
123840483 5264 Brassicales-Malvales View MSA
124339888 5266 SBM View MSA
124253018 5268 Malvidae View MSA
124072102 5270 Rosid View MSA
123744750 5271 Pentapetalae View MSA
122788933 5272 Eudicot View MSA
122041616 5273 Angiosperm View MSA
121350334 5274 Embryophyte View MSA
123381683 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.225        
cufflinks 10.6        
cufflinks 11.842        
cufflinks 10.958        
cufflinks 12.848       High
cufflinks 8.466       Low

0 Strain