Gene : AT5G22960 A. thaliana TAIR10
Defline:  (1 of 4) K16298 - serine carboxypeptidase-like clade IV [EC:3.4.16.-] (SCPL-IV) Genomic Order:  2169
Name:  ? AT5G22960 Secondary Identifier:  ? PAC:19668910
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G22960 0.5kb upstream 0.5kb upstream 1539 true Chr5: 7684014-7685552 Arabidopsis thaliana
AT5G22960 0.5kb upstream 0.5kb upstream 500 false Chr5: 7685053-7685552 Arabidopsis thaliana
AT5G22960 0.5kb downstream 0.5kb downstream 1539 true Chr5: 7683514-7685052 Arabidopsis thaliana
AT5G22960 0.5kb downstream 0.5kb downstream 500 false Chr5: 7683514-7684013 Arabidopsis thaliana
AT5G22960 1.0kb upstream 1.0kb upstream 2039 true Chr5: 7684014-7686052 Arabidopsis thaliana
AT5G22960 1.0kb upstream 1.0kb upstream 1000 false Chr5: 7685053-7686052 Arabidopsis thaliana
AT5G22960 1.0kb downstream 1.0kb downstream 2039 true Chr5: 7683014-7685052 Arabidopsis thaliana
AT5G22960 1.0kb downstream 1.0kb downstream 1000 false Chr5: 7683014-7684013 Arabidopsis thaliana
AT5G22960 2.0kb upstream 2.0kb upstream 3039 true Chr5: 7684014-7687052 Arabidopsis thaliana
AT5G22960 2.0kb upstream 2.0kb upstream 2000 false Chr5: 7685053-7687052 Arabidopsis thaliana
AT5G22960 2.0kb downstream 2.0kb downstream 3039 true Chr5: 7682014-7685052 Arabidopsis thaliana
AT5G22960 2.0kb downstream 2.0kb downstream 2000 false Chr5: 7682014-7684013 Arabidopsis thaliana
AT5G22960 5.0kb upstream 5.0kb upstream 6039 true Chr5: 7684014-7690052 Arabidopsis thaliana
AT5G22960 5.0kb upstream 5.0kb upstream 5000 false Chr5: 7685053-7690052 Arabidopsis thaliana
AT5G22960 5.0kb downstream 5.0kb downstream 6039 true Chr5: 7679014-7685052 Arabidopsis thaliana
AT5G22960 5.0kb downstream 5.0kb downstream 5000 false Chr5: 7679014-7684013 Arabidopsis thaliana
AT5G22960 10.0kb upstream 10.0kb upstream 11039 true Chr5: 7684014-7695052 Arabidopsis thaliana
AT5G22960 10.0kb upstream 10.0kb upstream 10000 false Chr5: 7685053-7695052 Arabidopsis thaliana
AT5G22960 10.0kb downstream 10.0kb downstream 11039 true Chr5: 7674014-7685052 Arabidopsis thaliana
AT5G22960 10.0kb downstream 10.0kb downstream 10000 false Chr5: 7674014-7684013 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122331163 5261 Brassicaceae Singleton cluster - no MSA
123772366 5264 Brassicales-Malvales Singleton cluster - no MSA
124270883 5266 SBM Singleton cluster - no MSA
124126929 5268 Malvidae Singleton cluster - no MSA
123855811 5270 Rosid Singleton cluster - no MSA
123752631 5271 Pentapetalae View MSA
122797203 5272 Eudicot View MSA
122050629 5273 Angiosperm View MSA
121312037 5274 Embryophyte View MSA
123349249 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.058     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain