Gene : AT5G19730 A. thaliana TAIR10
Defline:  (1 of 1) PTHR31321//PTHR31321:SF17 - FAMILY NOT NAMED // PECTINESTERASE 53-RELATED Genomic Order:  1904
Name:  ? AT5G19730 Secondary Identifier:  ? PAC:19668075
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-1081 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G19730 0.5kb upstream 0.5kb upstream 3325 true Chr5: 6669958-6673282 Arabidopsis thaliana
AT5G19730 0.5kb upstream 0.5kb upstream 500 false Chr5: 6669958-6670457 Arabidopsis thaliana
AT5G19730 0.5kb downstream 0.5kb downstream 3325 true Chr5: 6670458-6673782 Arabidopsis thaliana
AT5G19730 0.5kb downstream 0.5kb downstream 500 false Chr5: 6673283-6673782 Arabidopsis thaliana
AT5G19730 1.0kb upstream 1.0kb upstream 3825 true Chr5: 6669458-6673282 Arabidopsis thaliana
AT5G19730 1.0kb upstream 1.0kb upstream 1000 false Chr5: 6669458-6670457 Arabidopsis thaliana
AT5G19730 1.0kb downstream 1.0kb downstream 3825 true Chr5: 6670458-6674282 Arabidopsis thaliana
AT5G19730 1.0kb downstream 1.0kb downstream 1000 false Chr5: 6673283-6674282 Arabidopsis thaliana
AT5G19730 2.0kb upstream 2.0kb upstream 4825 true Chr5: 6668458-6673282 Arabidopsis thaliana
AT5G19730 2.0kb upstream 2.0kb upstream 2000 false Chr5: 6668458-6670457 Arabidopsis thaliana
AT5G19730 2.0kb downstream 2.0kb downstream 4825 true Chr5: 6670458-6675282 Arabidopsis thaliana
AT5G19730 2.0kb downstream 2.0kb downstream 2000 false Chr5: 6673283-6675282 Arabidopsis thaliana
AT5G19730 5.0kb upstream 5.0kb upstream 7825 true Chr5: 6665458-6673282 Arabidopsis thaliana
AT5G19730 5.0kb upstream 5.0kb upstream 5000 false Chr5: 6665458-6670457 Arabidopsis thaliana
AT5G19730 5.0kb downstream 5.0kb downstream 7825 true Chr5: 6670458-6678282 Arabidopsis thaliana
AT5G19730 5.0kb downstream 5.0kb downstream 5000 false Chr5: 6673283-6678282 Arabidopsis thaliana
AT5G19730 10.0kb upstream 10.0kb upstream 12825 true Chr5: 6660458-6673282 Arabidopsis thaliana
AT5G19730 10.0kb upstream 10.0kb upstream 10000 false Chr5: 6660458-6670457 Arabidopsis thaliana
AT5G19730 10.0kb downstream 10.0kb downstream 12825 true Chr5: 6670458-6683282 Arabidopsis thaliana
AT5G19730 10.0kb downstream 10.0kb downstream 10000 false Chr5: 6673283-6683282 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373168 5261 Brassicaceae View MSA
123835653 5264 Brassicales-Malvales View MSA
124350077 5266 SBM View MSA
124237911 5268 Malvidae View MSA
124072507 5270 Rosid View MSA
123749386 5271 Pentapetalae View MSA
122794986 5272 Eudicot View MSA
122041979 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.526        
cufflinks 7.09        
cufflinks 1.233        
cufflinks 6.764        
cufflinks 1.04       Low
cufflinks 6.048        

0 Strain