Gene : AT5G20390 A. thaliana TAIR10
Defline:  (1 of 2) 3.2.1.73 - Licheninase / Mixed linkage beta-glucanase Genomic Order:  1974
Name:  ? AT5G20390 Secondary Identifier:  ? PAC:19666585
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G20390 0.5kb upstream 0.5kb upstream 1865 true Chr5: 6892831-6894695 Arabidopsis thaliana
AT5G20390 0.5kb upstream 0.5kb upstream 500 false Chr5: 6894196-6894695 Arabidopsis thaliana
AT5G20390 0.5kb downstream 0.5kb downstream 1865 true Chr5: 6892331-6894195 Arabidopsis thaliana
AT5G20390 0.5kb downstream 0.5kb downstream 500 false Chr5: 6892331-6892830 Arabidopsis thaliana
AT5G20390 1.0kb upstream 1.0kb upstream 2365 true Chr5: 6892831-6895195 Arabidopsis thaliana
AT5G20390 1.0kb upstream 1.0kb upstream 1000 false Chr5: 6894196-6895195 Arabidopsis thaliana
AT5G20390 1.0kb downstream 1.0kb downstream 2365 true Chr5: 6891831-6894195 Arabidopsis thaliana
AT5G20390 1.0kb downstream 1.0kb downstream 1000 false Chr5: 6891831-6892830 Arabidopsis thaliana
AT5G20390 2.0kb upstream 2.0kb upstream 3365 true Chr5: 6892831-6896195 Arabidopsis thaliana
AT5G20390 2.0kb upstream 2.0kb upstream 2000 false Chr5: 6894196-6896195 Arabidopsis thaliana
AT5G20390 2.0kb downstream 2.0kb downstream 3365 true Chr5: 6890831-6894195 Arabidopsis thaliana
AT5G20390 2.0kb downstream 2.0kb downstream 2000 false Chr5: 6890831-6892830 Arabidopsis thaliana
AT5G20390 5.0kb upstream 5.0kb upstream 6365 true Chr5: 6892831-6899195 Arabidopsis thaliana
AT5G20390 5.0kb upstream 5.0kb upstream 5000 false Chr5: 6894196-6899195 Arabidopsis thaliana
AT5G20390 5.0kb downstream 5.0kb downstream 6365 true Chr5: 6887831-6894195 Arabidopsis thaliana
AT5G20390 5.0kb downstream 5.0kb downstream 5000 false Chr5: 6887831-6892830 Arabidopsis thaliana
AT5G20390 10.0kb upstream 10.0kb upstream 11365 true Chr5: 6892831-6904195 Arabidopsis thaliana
AT5G20390 10.0kb upstream 10.0kb upstream 10000 false Chr5: 6894196-6904195 Arabidopsis thaliana
AT5G20390 10.0kb downstream 10.0kb downstream 11365 true Chr5: 6882831-6894195 Arabidopsis thaliana
AT5G20390 10.0kb downstream 10.0kb downstream 10000 false Chr5: 6882831-6892830 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380901 5261 Brassicaceae View MSA
123802959 5264 Brassicales-Malvales View MSA
124350691 5266 SBM View MSA
124248032 5268 Malvidae View MSA
124073556 5270 Rosid View MSA
123753144 5271 Pentapetalae View MSA
122796626 5272 Eudicot View MSA
122051222 5273 Angiosperm View MSA
121351779 5274 Embryophyte View MSA
123382322 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain