Gene : AT5G14550 A. thaliana TAIR10
Defline:  (1 of 33) PF02485 - Core-2/I-Branching enzyme (Branch) Genomic Order:  1352
Name:  ? AT5G14550 Secondary Identifier:  ? PAC:19669012
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G14550 0.5kb upstream 0.5kb upstream 3550 true Chr5: 4691006-4694555 Arabidopsis thaliana
AT5G14550 0.5kb upstream 0.5kb upstream 500 false Chr5: 4694056-4694555 Arabidopsis thaliana
AT5G14550 0.5kb downstream 0.5kb downstream 3550 true Chr5: 4690506-4694055 Arabidopsis thaliana
AT5G14550 0.5kb downstream 0.5kb downstream 500 false Chr5: 4690506-4691005 Arabidopsis thaliana
AT5G14550 1.0kb upstream 1.0kb upstream 4050 true Chr5: 4691006-4695055 Arabidopsis thaliana
AT5G14550 1.0kb upstream 1.0kb upstream 1000 false Chr5: 4694056-4695055 Arabidopsis thaliana
AT5G14550 1.0kb downstream 1.0kb downstream 4050 true Chr5: 4690006-4694055 Arabidopsis thaliana
AT5G14550 1.0kb downstream 1.0kb downstream 1000 false Chr5: 4690006-4691005 Arabidopsis thaliana
AT5G14550 2.0kb upstream 2.0kb upstream 5050 true Chr5: 4691006-4696055 Arabidopsis thaliana
AT5G14550 2.0kb upstream 2.0kb upstream 2000 false Chr5: 4694056-4696055 Arabidopsis thaliana
AT5G14550 2.0kb downstream 2.0kb downstream 5050 true Chr5: 4689006-4694055 Arabidopsis thaliana
AT5G14550 2.0kb downstream 2.0kb downstream 2000 false Chr5: 4689006-4691005 Arabidopsis thaliana
AT5G14550 5.0kb upstream 5.0kb upstream 8050 true Chr5: 4691006-4699055 Arabidopsis thaliana
AT5G14550 5.0kb upstream 5.0kb upstream 5000 false Chr5: 4694056-4699055 Arabidopsis thaliana
AT5G14550 5.0kb downstream 5.0kb downstream 8050 true Chr5: 4686006-4694055 Arabidopsis thaliana
AT5G14550 5.0kb downstream 5.0kb downstream 5000 false Chr5: 4686006-4691005 Arabidopsis thaliana
AT5G14550 10.0kb upstream 10.0kb upstream 13050 true Chr5: 4691006-4704055 Arabidopsis thaliana
AT5G14550 10.0kb upstream 10.0kb upstream 10000 false Chr5: 4694056-4704055 Arabidopsis thaliana
AT5G14550 10.0kb downstream 10.0kb downstream 13050 true Chr5: 4681006-4694055 Arabidopsis thaliana
AT5G14550 10.0kb downstream 10.0kb downstream 10000 false Chr5: 4681006-4691005 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372940 5261 Brassicaceae View MSA
123830712 5264 Brassicales-Malvales View MSA
124345200 5266 SBM View MSA
124249568 5268 Malvidae View MSA
124066667 5270 Rosid View MSA
123753722 5271 Pentapetalae View MSA
122788010 5272 Eudicot View MSA
122051448 5273 Angiosperm View MSA
121351490 5274 Embryophyte View MSA
123428085 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.621       Low
cufflinks 11.209       High
cufflinks 5.227        
cufflinks 9.152        
cufflinks 5.68        
cufflinks 7.577        

0 Strain