Gene : AT5G15490 A. thaliana TAIR10
Defline:  (1 of 5) 1.1.1.22 - UDP-glucose 6-dehydrogenase Genomic Order:  1446
Name:  ? AT5G15490 Secondary Identifier:  ? PAC:19673268
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-4821 Arabidopsis thaliana pathologic  
Athaliana PWY-7346 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G15490 0.5kb upstream 0.5kb upstream 3056 true Chr5: 5027639-5030694 Arabidopsis thaliana
AT5G15490 0.5kb upstream 0.5kb upstream 500 false Chr5: 5030195-5030694 Arabidopsis thaliana
AT5G15490 0.5kb downstream 0.5kb downstream 3056 true Chr5: 5027139-5030194 Arabidopsis thaliana
AT5G15490 0.5kb downstream 0.5kb downstream 500 false Chr5: 5027139-5027638 Arabidopsis thaliana
AT5G15490 1.0kb upstream 1.0kb upstream 3556 true Chr5: 5027639-5031194 Arabidopsis thaliana
AT5G15490 1.0kb upstream 1.0kb upstream 1000 false Chr5: 5030195-5031194 Arabidopsis thaliana
AT5G15490 1.0kb downstream 1.0kb downstream 3556 true Chr5: 5026639-5030194 Arabidopsis thaliana
AT5G15490 1.0kb downstream 1.0kb downstream 1000 false Chr5: 5026639-5027638 Arabidopsis thaliana
AT5G15490 2.0kb upstream 2.0kb upstream 4556 true Chr5: 5027639-5032194 Arabidopsis thaliana
AT5G15490 2.0kb upstream 2.0kb upstream 2000 false Chr5: 5030195-5032194 Arabidopsis thaliana
AT5G15490 2.0kb downstream 2.0kb downstream 4556 true Chr5: 5025639-5030194 Arabidopsis thaliana
AT5G15490 2.0kb downstream 2.0kb downstream 2000 false Chr5: 5025639-5027638 Arabidopsis thaliana
AT5G15490 5.0kb upstream 5.0kb upstream 7556 true Chr5: 5027639-5035194 Arabidopsis thaliana
AT5G15490 5.0kb upstream 5.0kb upstream 5000 false Chr5: 5030195-5035194 Arabidopsis thaliana
AT5G15490 5.0kb downstream 5.0kb downstream 7556 true Chr5: 5022639-5030194 Arabidopsis thaliana
AT5G15490 5.0kb downstream 5.0kb downstream 5000 false Chr5: 5022639-5027638 Arabidopsis thaliana
AT5G15490 10.0kb upstream 10.0kb upstream 12556 true Chr5: 5027639-5040194 Arabidopsis thaliana
AT5G15490 10.0kb upstream 10.0kb upstream 10000 false Chr5: 5030195-5040194 Arabidopsis thaliana
AT5G15490 10.0kb downstream 10.0kb downstream 12556 true Chr5: 5017639-5030194 Arabidopsis thaliana
AT5G15490 10.0kb downstream 10.0kb downstream 10000 false Chr5: 5017639-5027638 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376310 5261 Brassicaceae View MSA
123840319 5264 Brassicales-Malvales View MSA
124349815 5266 SBM View MSA
124253382 5268 Malvidae View MSA
124072920 5270 Rosid View MSA
123748185 5271 Pentapetalae View MSA
122786809 5272 Eudicot View MSA
122047797 5273 Angiosperm View MSA
121346775 5274 Embryophyte View MSA
123428129 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.51        
cufflinks 41.524     High  
cufflinks 14.338       Low
cufflinks 53.194     High  
cufflinks 15.999        
cufflinks 81.335     High High

0 Strain