Gene : AT5G10560 A. thaliana TAIR10
Defline:  (1 of 1) PTHR30620:SF19 - BETA-D-XYLOSIDASE 6-RELATED Genomic Order:  977
Name:  ? AT5G10560 Secondary Identifier:  ? PAC:19672410
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G10560 0.5kb upstream 0.5kb upstream 3612 true Chr5: 3336255-3339866 Arabidopsis thaliana
AT5G10560 0.5kb upstream 0.5kb upstream 500 false Chr5: 3339367-3339866 Arabidopsis thaliana
AT5G10560 0.5kb downstream 0.5kb downstream 3612 true Chr5: 3335755-3339366 Arabidopsis thaliana
AT5G10560 0.5kb downstream 0.5kb downstream 500 false Chr5: 3335755-3336254 Arabidopsis thaliana
AT5G10560 1.0kb upstream 1.0kb upstream 4112 true Chr5: 3336255-3340366 Arabidopsis thaliana
AT5G10560 1.0kb upstream 1.0kb upstream 1000 false Chr5: 3339367-3340366 Arabidopsis thaliana
AT5G10560 1.0kb downstream 1.0kb downstream 4112 true Chr5: 3335255-3339366 Arabidopsis thaliana
AT5G10560 1.0kb downstream 1.0kb downstream 1000 false Chr5: 3335255-3336254 Arabidopsis thaliana
AT5G10560 2.0kb upstream 2.0kb upstream 5112 true Chr5: 3336255-3341366 Arabidopsis thaliana
AT5G10560 2.0kb upstream 2.0kb upstream 2000 false Chr5: 3339367-3341366 Arabidopsis thaliana
AT5G10560 2.0kb downstream 2.0kb downstream 5112 true Chr5: 3334255-3339366 Arabidopsis thaliana
AT5G10560 2.0kb downstream 2.0kb downstream 2000 false Chr5: 3334255-3336254 Arabidopsis thaliana
AT5G10560 5.0kb upstream 5.0kb upstream 8112 true Chr5: 3336255-3344366 Arabidopsis thaliana
AT5G10560 5.0kb upstream 5.0kb upstream 5000 false Chr5: 3339367-3344366 Arabidopsis thaliana
AT5G10560 5.0kb downstream 5.0kb downstream 8112 true Chr5: 3331255-3339366 Arabidopsis thaliana
AT5G10560 5.0kb downstream 5.0kb downstream 5000 false Chr5: 3331255-3336254 Arabidopsis thaliana
AT5G10560 10.0kb upstream 10.0kb upstream 13112 true Chr5: 3336255-3349366 Arabidopsis thaliana
AT5G10560 10.0kb upstream 10.0kb upstream 10000 false Chr5: 3339367-3349366 Arabidopsis thaliana
AT5G10560 10.0kb downstream 10.0kb downstream 13112 true Chr5: 3326255-3339366 Arabidopsis thaliana
AT5G10560 10.0kb downstream 10.0kb downstream 10000 false Chr5: 3326255-3336254 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378971 5261 Brassicaceae View MSA
123837067 5264 Brassicales-Malvales View MSA
124347005 5266 SBM View MSA
124253802 5268 Malvidae View MSA
124074265 5270 Rosid View MSA
123741935 5271 Pentapetalae View MSA
122794442 5272 Eudicot View MSA
122048510 5273 Angiosperm View MSA
121349595 5274 Embryophyte View MSA
123381370 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.657     High High
cufflinks 14.929       Low
cufflinks 20.728        
cufflinks 15.441        
cufflinks 21.14        
cufflinks 17.888        

0 Strain